Input parameters:

  Query = ENSP00000407845 (Len=714)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSP00000407845, Len=714):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MVRWLSAKLGPTVASRHVARNLLRLLTSCYVGPTRQQFTVSSGESPPLSAGNIYQKRPVLGDIVSGPVLSCLLHIARLYG 80  
WD40-rpts                                                                                      

Query       81 EPVLTYQYLPYISYLVAPGSASGPSRLNSRKEAGLLAAVTLTQKIIVYLSDTTLMDILPRISHEVLLPVLSFLTSLVTGF 160 
WD40-rpts                                                                                      

Query      161 PSGAQARTILCVKTISLIALICLRIGQEMVQQHLSEPVATFFQVFSQLHELRQQDLKLDPAGRGEGQLPQVVFSDGQQRP 240 
WD40-rpts                                                                                      

Query      241 VDPALLDELQKVFTLEMAYTIYVPFSCLLGDIIRKIIPNHELVGELAALYLESISPSSRNPASVEPTMPGTGPEWDPHGG 320 
WD40-rpts                                         (__________________WD 1_________________)  (_

Query      321 GCPQDDGHSGTFGSVLVGNRIQIPNDSRPENPGPLGPISGVGGGGLGSGSDDNALKQELPRSVHGLSGNWLAYWQYEIGV 400 
WD40-rpts      _______________WD 2________________)                                           (

Query      401 SQQDAHFHFHQIRLQSFPGHSGAVKCVAPLSSEDFFLSGSKDRTVRLWPLYNYGDGTSETAPRLVYTQHRKSVFFVGQLE 480 
WD40-rpts      ______________________WD 3______________________)          (________________WD 4

Query      481 APQHVVSCDGAVHVWDPFTGKTLRTVEPLDSRVPLTAVAVMPAPHTSITMASSDSTLRFVDCRKPGLQHEFRLGGGLNPG 560 
WD40-rpts      _______________)   (__________________WD 5__________________)       (___________

Query      561 LVRALAISPSGRSVVAGFSSGFMVLLDTRTGLVLRGWPAHEGDILQIKAVEGSVLVSSSSDHSLTVWKELEQKPTHHYKS 640 
WD40-rpts      ______WD 6________________)   (________________WD 7________________)   (________

Query      641 ASDPIHTFDLYGSEVVTGTVSNKIGVCSLLEPPSQATTKLSSENFRGTLTSLALLPTKRHLLLGSDNGVIRLLA 714 
WD40-rpts      ________WD 8_______________)(____________________WD 9____________________)

9 WD40-repeats found in QUERY=ENSP00000407845 (Len=714):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  6   276-316      6.49  382.93  0.00043       25.0%     28.82
  WD 2:  Seg  9   319-356      4.88  316.41  0.00338       15.0%     10.04
  WD 3:  Seg 12   400-449      8.72  475.06  2.5e-05       27.5%     49.52
  WD 4:  Seg 16   460-496      6.21  371.04  0.00062       25.0%     46.01
  WD 5:  Seg 20   500-541      6.66  389.91  0.00035       32.5%     54.44
  WD 6:  Seg 24   549-587      7.58  427.65  0.00011       22.5%     46.45
  WD 7:  Seg 28   591-628      7.90  440.94  7.1e-05       30.0%     52.06
  WD 8:  Seg 32   632-668      6.22  371.56  0.00061       15.0%     51.61
  WD 9:  Seg 36   669-714      7.43  421.70  0.00013       22.5%     42.37

Multiple sequence alignment of 9 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  276-316    -II----------PNHELVGELAAL--YLESISPSSR-NPASVEPTMPGTGPEWD
   WD 2  319-356    -GG----------GCPQDDGHSGTF--GSVLVGNRIQ--IPN--DSRPENPGPLG
   WD 3  400-449    VSQQDAHFHFHQIRLQSFPGHSGAV--KCVAPLSSED-FFLS--GSKDRTVRLWP
   WD 4  460-496    -TA----------PRLVYTQHRKSV--FFVGQLEAPQ-HVVS--C--DGAVHVWD
   WD 5  500-541    -GK----------TLRTVEPLDSRVPLTAVAVMPAPHTSITM--ASSDSTLRFVD
   WD 6  549-587    -HE----------FRLGGGLNPGLV--RALAISPSGR-SVVA--GFSSGFMVLLD
   WD 7  591-628    -GL----------VLRGWPAHEGDI--LQIK-AVEGS-VLVS--SSSDHSLTVWK
   WD 8  632-668    -QK----------PTHHYKSASDPI--HT--FDLYGS-EVVT--GTVSNKIGVCS
   WD 9  669-714    LLE----PPSQATTKLSSENFRGTL--TSLALLPTKR-HLLL--GSDNGVIRLLA

   WD40 Template    TGE----------CLRTLSGHTSGV--TSVSFSPDGK-RLVS--GSEDGTIKVWD