Input parameters:
Query = ENSP00000407835 (Len=104)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000407835, Len=104):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 MTVHDKFLALGTHYGKVYLLDVQGNITQKFDVSPVKINQISLDESGEHMGVCSEDGKVQVFGLYSGEEFHETFDCPIKII 80
WD40-rpts (_________________WD 1________________)(_________________
Query 81 AVHPHFVRSSCKQFVTGGKKVSAV 104
WD40-rpts WD 2_________________)
2 WD40-repeats found in QUERY=ENSP00000407835 (Len=104):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 3 24-62 8.36 459.88 3.9e-05 20.0% 53.52
WD 2: Seg 7 63-102 3.34 252.72 0.02419 7.5% 22.62
Multiple sequence alignment of 2 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 24-62 -GNITQKFDVSPVKINQISLDESGEHMGVCSEDGKVQVFG
WD 2 63-102 LYSGEEFHETFDCPIKIIAVHPHFVRSSCKQFVTGGKKVS
WD40 Template TGECLRTLSGHTSGVTSVSFSPDGKRLVSGSEDGTIKVWD