Input parameters:

  Query = ENSP00000406523 (Len=410)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSP00000406523, Len=410):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MTFPPALLPPNPVTPPRPRTLPPPGPARPVTSASLLPSQHLPRTASVSSSVVYGRSPVMAFESHPHLRGSSVSSSLPSIP 80  
WD40-rpts                     (_________________WD 1_________________)                 (_______

Query       81 GGKPAYSFHVSADGQMQPVPFPSDALVGAGIPRHARQLHTLAHGEVVCAVTISGSTQHVYTGGKGCVKVWDVGQPGAKTP 160 
WD40-rpts      __________WD 2________________)  (________________WD 3________________)        (

Query      161 VAQLDCLNRDNYIRSCKLLPDGRSLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAVSPDAKVCFSCCSDGNIVV 240 
WD40-rpts      _________________WD 4________________)     (_________________WD 5_______________

Query      241 WDLQNQTMVRQFQGHTDGASCIDISDYGTRLWTGGLDNTVRCWDLREGRQLQQHDFSSQIFSLGHCPNQDWLAVGMESSN 320 
WD40-rpts      _)   (_________________WD 6________________)(__________________WD 7_____________

Query      321 VEILHVRKPEKYQLHLHESCVLSLKFASCGRWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISRNNKYIVTGSGD 400 
WD40-rpts      ____)(__________________WD 8_________________)(__________________WD 9___________

Query      401 KKATVYEVVY 410 
WD40-rpts      ______)   

9 WD40-repeats found in QUERY=ENSP00000406523 (Len=410):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1    16-55       6.83  396.86  0.00028       17.5%     15.73
  WD 2:  Seg  2    73-111      3.23  248.04  0.02792       17.5%     27.90
  WD 3:  Seg  5   114-151      6.37  377.66  0.00051       25.0%     51.97
  WD 4:  Seg  9   160-198      8.72  474.78  2.5e-05       25.0%     55.13
  WD 5:  Seg 13   204-242      8.98  485.51  1.8e-05       30.0%     55.14
  WD 6:  Seg 17   246-284     10.04  529.57  4.5e-06       35.0%     55.59
  WD 7:  Seg 21   285-325      7.25  414.22  0.00016       17.5%     54.61
  WD 8:  Seg 25   326-366      8.57  468.82  3.0e-05       27.5%     55.40
  WD 9:  Seg 29   367-407      8.02  446.10  6.0e-05       30.0%     55.48

Multiple sequence alignment of 9 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   16-55     PRP-RTLPPP-GPARPVTSASLLPSQHLPR-TASVSSSVVYGR
   WD 2   73-111    -SS-SLPSIP-GGKP-AYSFHVSADGQMQPVPFPSDALVGAGI
   WD 3  114-151    -HA-RQLHTL-AHGEVVCAVTISGSTQHVY-TGG-KGCVKVWD
   WD 4  160-198    -PV-AQLDCL-NRDNYIRSCKLLPDGRSLI-VGGEASTLSIWD
   WD 5  204-242    -PR-IKAELT-SSAPACYALAVSPDAKVCF-SCCSDGNIVVWD
   WD 6  246-284    -QT-MVRQFQ-GHTDGASCIDISDYGTRLW-TGGLDNTVRCWD
   WD 7  285-325    LRE-GRQLQQHDFSSQIFSLGHCPNQDWLA-VGMESSNVEILH
   WD 8  326-366    VRKPEKYQLH-LHESCVLSLKFASCGRWFV-STGKDNLLNAWR
   WD 9  367-407    TPYGASIFQS-KESSSVLSCDISRNNKYIV-TGSGDKKATVYE

   WD40 Template    TGE-CLRTLS-GHTSGVTSVSFSPDGKRLV-SGSEDGTIKVWD