Input parameters:
Query = ENSP00000406242 (Len=140)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000406242, Len=140):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 MGLEAKNSPCCHQHGDFVPYPILSARVFQPEVEEATLAAHAISHDCVCSGGGVLLPHDWRNNYMILLNPQVLADERGHQR 80
WD40-rpts (____________
Query 81 PVAFLAYKVNGQYIMEGFASSFLFTMGGLGFIMLDQSNAPNIPKLNRFFFFYSLDSSVSY 140
WD40-rpts __________WD 1_____________________)
1 WD40-repeats found in QUERY=ENSP00000406242 (Len=140):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 5 68-116 3.25 249.00 0.02711 17.5% 27.04
Multiple sequence alignment of 1 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 68-116 NPQVLADERGHQRPVAFLAYKVNGQYIMEGFASSFLFTMGGLGFIMLDQ
WD40 Template TGECLRTLSGHTSGVTSVSFSPDGKRLVS---------GSEDGTIKVWD