Input parameters:

  Query = ENSP00000406202 (Len=567)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSP00000406202, Len=567):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MSGTKPDILWAPHHVDRFVVCDSELSLYHVESTVNSELKAGSLRLSEDSAATLLSINSDTPYMKCVAWYLNYDPECLLAV 80  
WD40-rpts                                                                                      

Query       81 GQANGRVVLTSLGQDHNSKFKDLIGKEFVPKHARQCNTLAWNPLDSNWLAAGLDKHRADFSVLIWDICSKYTPDIVPMEK 160 
WD40-rpts                 (_________________________WD 1________________________)(_____________

Query      161 VKLSAGETETTLLVTKPLYELGQNDACLSLCWLPRDQKLLLAGMHRNLAIFDLRNTSQKMFVNTKAVQGVTVDPYFHDRV 240 
WD40-rpts      _________________WD 2______________________________)(_________________WD 3______

Query      241 ASFYEGQVAIWDLRKFEKPVLTLTEQPKPLTKVAWCPTRTGLLATLTRDSNIIRLYDMQHTPTPIGDETEPTIIERSVQP 320 
WD40-rpts      ___________)    (__________________WD 4_________________)(______________________

Query      321 CDNYIASFAWHPTSQNRMIVVTPNRTMSDFTVFERISLAWSPITSLMWACGRHLYECTEEENDNSLEKDIATKMRLRALS 400 
WD40-rpts      __WD 5________________________)                                                 

Query      401 RYGLDTEQVWRNHILAGNEDPQLKSLWYTLHFMKQYTEDMDQKSPGNKGSLVYAGIKSIVKSSLGMVESSRHNWSGLDKQ 480 
WD40-rpts                                                                                      

Query      481 SDIQNLNEERILALQLCGWIKKGTDVDVGPFLNSLVQEGEWERAAAVALFNLDIRRAIQILNEGASSEKGRRSESQCGSN 560 
WD40-rpts                                                                                      

Query      561 GFIGLYG 567 
WD40-rpts             

5 WD40-repeats found in QUERY=ENSP00000406202 (Len=567):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  8    92-146      4.55  302.56  0.00520       22.5%     39.11
  WD 2:  Seg 11   147-212      3.26  249.48  0.02672       12.5%     42.90
  WD 3:  Seg 14   213-252      7.47  423.07  0.00012       20.0%     45.54
  WD 4:  Seg 18   257-297      4.52  301.41  0.00539       22.5%     51.11
  WD 5:  Seg 22   298-351      3.62  264.25  0.01698       12.5%     53.27

Multiple sequence alignment of 5 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   92-146    LGQ---DHNSKFKDLIGKE--------------------------FVPKHARQCNTLAWNPLDSNWLAAGLDKHRADF-SVLIWD
   WD 2  147-212    ICS-------------KYTPDIVPMEKVKLSAGETETTLLVTKPLYELGQNDACLSLCWLP-RDQKLLLA----GMHR-NLAIFD
   WD 3  213-252    LRN-------------TSQ--------------------------KMFVNTKAVQGVTVDP-YFHDRVAS----FYEG-QVAIWD
   WD 4  257-297    -EK-------------PVL--------------------------TLTEQPKPLTKVAWCPTRTGLLATL----TRDSNIIRLYD
   WD 5  298-351    MQHTPTPIGDETEPTIIER--------------------------SVQPCDNYIASFAWHPTSQNRMIVV----TPNR-TMSDFT

   WD40 Template    TGE-------------CLR--------------------------TLSGHTSGVTSVSFSP-DGKRLVSG----SEDG-TIKVWD