Input parameters:
Query = ENSP00000405511 (Len=118)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000405511, Len=118):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 MGKQNSKLAPEVMEDLVKSTEFNEHELKQWYKGFLKDCPSGRLNLEEFQQLYVKFFPYGDASKFAQHAFRTFDKNGDGTI 80
WD40-rpts (________________________________________________________WD 1___________________
Query 81 DFREFICALSITSRGSFEQKLNWAFNMYDLDGDGKITR 118
WD40-rpts _____________________________________)
1 WD40-repeats found in QUERY=ENSP00000405511 (Len=118):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 1 1-118 3.06 240.90 0.03473 22.5% -13.16
Multiple sequence alignment of 1 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 1-118 MGKQNSKLAPEVMEDLVKSTEFNEHELKQWYKGFLKDCPSGRLNLEEFQQLYVKFFPYGDASKFAQHAFRTFDKNGDGTIDFREFICALSITSRGSFEQKLNWAFNMYDLDGDGKITR
WD40 Template TGECLRTLS------------GH----------------TSGVT--------------SV------------SFSPDGKRL-----------VSGS-------------EDGTIKVWD