Input parameters:
Query = ENSP00000403920 (Len=142)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000403920, Len=142):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 MSLHGKRKEIYKYEAPWTVYAMNWSVRPDKRFRLALGSFVEEYNNKVVILDVRVPCTPVARLNNHRACVNGIAWAPHSSC 80
WD40-rpts (_________________WD 1___
Query 81 HICTAADDHQALIWDIQQMPRAIEDPILAYTAEGEINNVQWASTQPDWIAICYNNCLEILRV 142
WD40-rpts ______________)
1 WD40-repeats found in QUERY=ENSP00000403920 (Len=142):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 5 56-95 5.08 324.71 0.00262 17.5% 53.00
Multiple sequence alignment of 1 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 56-95 CTPVARLNNHRACVNGIAWAPHSSCHICTAADDHQALIWD
WD40 Template GECLRTLSGHTSGVTSVSFSP-DGKRLVSGSEDGTIKVWD