Input parameters:

  Query = ENSP00000401560 (Len=580)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSP00000401560, Len=580):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MDILPRISHEVLLPVLSFLTSLVTGFPSGAQARTILCVKTISLIALICLRIGQEMVQQHLSEPVATFFQVFSQLHELRQQ 80  
WD40-rpts                                                                                      

Query       81 DLKLDPAGRGEGQLPQVVFSDGQQRPVDPALLDELQKVFTLEMAYTIYVPFSCLLGDIIRKIIPNHELVGELAALYLESI 160 
WD40-rpts                                                                   (__________________

Query      161 SPSSRNPASVEPTMPGTGPEWDPHGGGCPQDDGHSGTFGSVLVGNRIQIPNDSRPENPGPLGPISGVGGGGLGSGSDDNA 240 
WD40-rpts      WD 1_________________)  (________________WD 2________________)                  

Query      241 LKQELPRSVHGLSGNWLAYWQYEIGVSQQDAHFHFHQIRLQSFPGHSGAVKCVAPLSSEDFFLSGSKDRTVRLWPLYNYG 320 
WD40-rpts                               (______________________WD 3______________________)     

Query      321 DGTSETAPRLVYTQHRKSVFFVGQLEAPQHVVSCDGAVHVWDPFTGKTLRTVEPLDSRVPLTAVAVMPAPHTSITMASSD 400 
WD40-rpts           (________________WD 4_______________)   (__________________WD 5____________

Query      401 STLRFVDCRKPGLQHEFRLGGGLNPGLVRALAISPSGRSVVAGFSSGFMVLLDTRTGLVLRGWPAHEGDILQIKAVEGSV 480 
WD40-rpts      ______)       (_________________WD 6________________)   (________________WD 7___

Query      481 LVSSSSDHSLTVWKELEQKPTHHYKSASDPIHTFDLYGSEVVTGTVSNKIGVCSLLEPPSQATTKLSSENFRGTLTSLAL 560 
WD40-rpts      _____________)   (________________WD 8_______________)(____________________WD 9_

Query      561 LPTKRHLLLGSDNGVIRLLA 580 
WD40-rpts      ___________________)

9 WD40-repeats found in QUERY=ENSP00000401560 (Len=580):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  3   142-182      6.22  371.47  0.00061       25.0%     35.16
  WD 2:  Seg  6   185-222      4.36  294.69  0.00663       15.0%     10.77
  WD 3:  Seg 11   266-315      8.65  471.86  2.7e-05       27.5%     47.85
  WD 4:  Seg 15   326-362      6.32  375.67  0.00054       25.0%     45.90
  WD 5:  Seg 19   366-407      6.71  392.03  0.00032       32.5%     55.51
  WD 6:  Seg 23   415-453      7.65  430.60  9.8e-05       22.5%     46.71
  WD 7:  Seg 27   457-494      7.96  443.41  6.6e-05       30.0%     53.05
  WD 8:  Seg 31   498-534      6.36  377.39  0.00051       15.0%     51.87
  WD 9:  Seg 35   535-580      7.60  428.55  0.00010       22.5%     42.15

Multiple sequence alignment of 9 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  142-182    -II----------PNHELVGELAAL--YLESISPSSRNP-ASVEPTMPGTGPEWD
   WD 2  185-222    -GG----------GCPQDDGHSGTF--GSVLVGNR--IQ--IPNDSRPENPGPLG
   WD 3  266-315    VSQQDAHFHFHQIRLQSFPGHSGAV--KCVAPLSS--ED-FFLSGSKDRTVRLWP
   WD 4  326-362    -TA----------PRLVYTQHRKSV--FFVGQLEA--PQ-HVVSC--DGAVHVWD
   WD 5  366-407    -GK----------TLRTVEPLDSRVPLTAVAVMPA--PHTSITMASSDSTLRFVD
   WD 6  415-453    -HE----------FRLGGGLNPGLV--RALAISPS--GR-SVVAGFSSGFMVLLD
   WD 7  457-494    -GL----------VLRGWPAHEGDI--LQIK-AVE--GS-VLVSSSSDHSLTVWK
   WD 8  498-534    -QK----------PTHHYKSASDPI--HT--FDLY--GS-EVVTGTVSNKIGVCS
   WD 9  535-580    LLE----PPSQATTKLSSENFRGTL--TSLALLPT--KR-HLLLGSDNGVIRLLA

   WD40 Template    TGE----------CLRTLSGHTSGV--TSVSFSPD--GK-RLVSGSEDGTIKVWD