Input parameters:
Query = ENSP00000401421 (Len=134)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000401421, Len=134):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 MAAHHRQNTAGRRKVQVSYVIRDEVEKYNRNGVNALQLDPALNRLFTAGRDSIIRIWSVNQHKQDPYIASMEHHTDWVND 80
WD40-rpts (________________WD 1_______________)(____________________W
Query 81 IVLCCNGKTLISASSDTTVKVWNAHKGFCMSTLRTHKYVCSITGLRKGLSICQG 134
WD40-rpts D 2___________________)
2 WD40-repeats found in QUERY=ENSP00000401421 (Len=134):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 3 22-58 8.65 471.77 2.7e-05 22.5% 46.09
WD 2: Seg 6 59-103 9.61 511.44 8.0e-06 32.5% 52.62
Multiple sequence alignment of 2 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 22-58 RDE--------VEKYNRNGVNALQLDPALNRLFTAGRDSIIRIWS
WD 2 59-103 VNQHKQDPYIASMEHHTDWVNDIVLCCNGKTLISASSDTTVKVWN
WD40 Template TGE-----CLRTLSGHTSGVTSVSFSPDGKRLVSGSEDGTIKVWD