Input parameters:

  Query = ENSP00000401003 (Len=454)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSP00000401003, Len=454):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MERKDFETWLDNISVTFLSLTDLQKNETLDHLISLSGAVQLRHLSNNLETLLKRDFLKLLPLELSFYLLKWLDPQTLLTC 80  
WD40-rpts                                                                                      

Query       81 CLVSKQWNKVISACTEVWQTACKNLGWQIDDSVQDALHWKKVYLKAILRMKQLEDHEAFETSSLIGHSARVYALYYKDGL 160 
WD40-rpts                                                       (____________________WD 1______

Query      161 LCTGSDDLSAKLWDVSTGQCVYGIQTHTCAAVKFDEQKLVTGSFDNTVACWEWSSGARTQHFRGHTGAVFSVDYNDELDI 240 
WD40-rpts      _____________)   (_______________WD 2______________)   (_________________WD 3___

Query      241 LVSGSADFTVKVWALSAGTCLNTLTGHTEWVTKVVLQKCKVKSLLHSPGDYILLSADKYEIKIWPIGREINCKCLKTLSV 320 
WD40-rpts      _____________)   (_____________________WD 4_____________________)      (________

Query      321 SEDRSICLQPRLHFDGKYIVCSSALGLYQWDFASYDILRVIKTPEIANLALLGFGDIFALLFDNRYLYIMDLRTESLISR 400 
WD40-rpts      _________WD 5_________________)(_________________WD 6_________________)         

Query      401 WPLPEYRKSKRGSSFLAGEASWLNGLDGHNDTGLVFATSMPDHSIHLVLWKEHG 454 
WD40-rpts               (_________________WD 7_________________)     

7 WD40-repeats found in QUERY=ENSP00000401003 (Len=454):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  4   130-174      6.42  379.98  0.00047       27.5%     50.36
  WD 2:  Seg  8   178-212      7.50  424.53  0.00012       30.0%     47.49
  WD 3:  Seg 12   216-254     10.15  533.84  4.0e-06       42.5%     50.68
  WD 4:  Seg 16   258-305      8.40  461.78  3.7e-05       37.5%     51.34
  WD 5:  Seg 20   312-351      5.90  358.26  0.00092       30.0%     49.39
  WD 6:  Seg 24   352-391      6.36  377.32  0.00051        7.5%     51.10
  WD 7:  Seg 28   410-449      5.77  353.07  0.00109       17.5%     41.79

Multiple sequence alignment of 7 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  130-174    MKQLEDHEAFETSSLIGHSARV--YALYYKD---------G---LLCTGSDDLSAKLWD
   WD 2  178-212    -GQC-------VYGIQTHT------CAAVKF---------D-EQKLVTGSFDNTVACWE
   WD 3  216-254    -GAR-------TQHFRGHTGAV--FSVDYND---------E-LDILVSGSADFTVKVWA
   WD 4  258-305    -GTC-------LNTLTGHTEWV--TKVVLQKCKVKSLLHSP-GDYILLSADKYEIKIWP
   WD 5  312-351    -CKC-------LKTLSVSEDRSICLQPRLHF---------D-GKYIVCSSAL-GLYQWD
   WD 6  352-391    FASY-------DILRVIKTPEI--ANLALLG---------F-GDIFALLFDNRYLYIMD
   WD 7  410-449    -KRG-------SSFLAGEASWL--NGLDGHN---------DTGLVFATSMPDHSIHLVL

   WD40 Template    TGEC-------LRTLSGHTSGV--TSVSFSP---------D-GKRLVSGSEDGTIKVWD