Input parameters:
Query = ENSP00000400728 (Len=97)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000400728, Len=97):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 MVEEENIRVVRCGGSELNFRRAVFSADSKYIFCVSGDFVKVYSTVTEECVHILHGHRNLVTGIQLNPNNHLQSQPTWKLL 80
WD40-rpts (_________________WD 1________________) (_________________WD 2____________
Query 81 IKDGFALPFTFIPKEIK 97
WD40-rpts ____)
2 WD40-repeats found in QUERY=ENSP00000400728 (Len=97):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 1 5-43 7.27 414.90 0.00016 22.5% 51.61
WD 2: Seg 5 47-85 8.02 445.93 6.1e-05 25.0% 37.16
Multiple sequence alignment of 2 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 5-43 ENIRVVRCGGSELNFRRAVFSADSKYIFCVSGD-FVKVYS
WD 2 47-85 -EECVHILHGHRNLVTGIQLNPNNHLQSQPTWKLLIKDGF
WD40 Template TGECLRTLSGHTSGVTSVSFSPDGKRLVSGSEDGTIKVWD