Input parameters:

  Query = ENSP00000400252 (Len=593)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSP00000400252, Len=593):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MEIVYVYVKKRSEFGKQCNFSDRQAELNIDIMPNPELAEQFVERNPVDTGIQCSISMSEHEANSERFEMETRGVNHVEGG 80  
WD40-rpts                                                                                      

Query       81 WPKDVNPLELEQTIRFRKKVEKDENYVNAIMQLGSIMEHCIKQNNAIDIYEEYFNDEEAMEVMEEDPSAKTINVFRDPQE 160 
WD40-rpts                                                                                      

Query      161 IKRAATHLSWHPDGNRKLAVAYSCLDFQRAPVGMSSDSYIWDLENPNKPELALKPSSPLVTLEFNPKDSHVLLGGCYNGQ 240 
WD40-rpts                                                   (_________________WD 1_____________

Query      241 IACWDTRKGSLVAELSTIESSHRDPVYGTIWLQSKTGTECFSASTDGQVMWWDIRKMSEPTEVVILDITKKEQLENALGA 320 
WD40-rpts      ____)       (__________________WD 2_________________)                           

Query      321 ISLEFESTLPTKFMVGTEQGIVISCNRKAKTSAEKIVCTFPGHHGPIYALQRNPFYPKNFLTVGDWTARIWSEDSRESSI 400 
WD40-rpts                                       (_________________WD 3________________)(_______

Query      401 MWTKYHMAYLTDAAWSPVRPTVFFTTRMDGTLDIWDFMFEQCDPTLSLKDNGCLIACGSQLGTTTLLEVSPGLSTLQRNE 480 
WD40-rpts      ____________WD 4___________________)                                            

Query      481 KNVASSMFERETRREKILEARHREMRLKEKGKAEGRDEEQTDEELAVDLEALVSKAEEEFFDIIFAELKKKEADAIKLTP 560 
WD40-rpts                                                                                      

Query      561 VPQQPSPEEDQVVEEGEEAAGEEGDEEVEEDLA 593 
WD40-rpts                                       

4 WD40-repeats found in QUERY=ENSP00000400252 (Len=593):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg 10   206-245      4.42  297.40  0.00610       25.0%     50.18
  WD 2:  Seg 14   253-293      5.12  325.96  0.00252       30.0%     48.13
  WD 3:  Seg 22   354-392      5.32  334.57  0.00193       17.5%     38.98
  WD 4:  Seg 25   393-436      4.38  295.70  0.00643       22.5%     52.94

Multiple sequence alignment of 4 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  206-245    -P---NKPELALKPSSPLVTLEF--NPKDSHVL-LGGCYNGQIACWD
   WD 2  253-293    -A---ELSTIESSHRDPVYGTIWLQSK-TGTEC-FSASTDGQVMWWD
   WD 3  354-392    -E---KIVCTFPGHHGPIYALQR--NP-FYPKN-FLTVGDWTARIWS
   WD 4  393-436    EDSRESSIMWTKYHMAYLTDAAW--SP-VRPTVFFTTRMDGTLDIWD

   WD40 Template    TG---ECLRTLSGHTSGVTSVSF--SP-DGKRL-VSGSEDGTIKVWD