Input parameters:

  Query = ENSP00000399970 (Len=422)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSP00000399970, Len=422):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 LTADIISTVEFNYSGDLLATGDKGGRVVIFQREQENKSRPHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQQ 80  
WD40-rpts      (_____________WD 1____________)                     (____________________WD 2___

Query       81 NAAHFLLSTNDKTIKLWKISERDKRAEGYNLKDEDGRLRDPFRITALRVPILKPMDLMVEASPRRIFANAHTYHINSISV 160 
WD40-rpts      _________________)                                          (_________________WD

Query      161 NSDHETYLSADDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPHQCNVFVYSSSKGTIRLCDMRSSALCDRH 240 
WD40-rpts       3________________)            (_________________WD 4________________)          

Query      241 SKFFEEPEDPSSRSFFSEIISSISDVKFSHSGRYMMTRDYLSVKVWDLNMESRPVETHQVHEYLRSKLCSLYENDCIFDK 320 
WD40-rpts               (________________WD 5________________)             (___________________

Query      321 FECCWNGSDSAIMTGSYNNFFRMFDRDTRRDVTLEASRESSKPRASLKPRKVCTGGKRRKDEISVDSLDFNKKILHTAWH 400 
WD40-rpts      _WD 6___________________)  (_________________WD 7________________)              

Query      401 PVDNVIAVAATNNLYIFQDKIN 422 
WD40-rpts                            

7 WD40-repeats found in QUERY=ENSP00000399970 (Len=422):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     1-31       5.26  332.00  0.00209       15.0%     46.14
  WD 2:  Seg  5    53-98       4.28  291.60  0.00730       15.0%     49.65
  WD 3:  Seg 12   141-179      7.95  442.86  6.7e-05       22.5%     51.49
  WD 4:  Seg 17   192-230      6.24  372.53  0.00059       25.0%     38.87
  WD 5:  Seg 21   250-287      6.65  389.56  0.00035       25.0%     41.76
  WD 6:  Seg 25   301-345      5.32  334.57  0.00193       10.0%     38.89
  WD 7:  Seg 28   348-386      5.18  328.64  0.00232       12.5%     22.69

Multiple sequence alignment of 7 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    1-31     ------------------LTADIISTVEFNY--SGDLLATGDKGGRVVIFQ
   WD 2   53-98     QSHEPEFDYLKS-----LEIEEKINKIRWLPQQNAAHFLLSTNDKTIKLWK
   WD 3  141-179    ASPR----RIFA-----NAHTYHINSISVNS--DHETYLS-ADDLRINLWH
   WD 4  192-230    IKP------ANM-----EELTEVITAAEFHP-HQCNVFVYSSSKGTIRLCD
   WD 5  250-287    -PSS----RSFF-----SEIISSISDVKFSH--SGRYMMTRD-YLSVKVWD
   WD 6  301-345    HEYL----RSKLCSLYENDCIFDKFECCWNG--SDSAIMTGSYNNFFRMFD
   WD 7  348-386    -TRR----DVTL-----EASRESSKPRASLK--PRKVCTGGKRRKDEISVD

   WD40 Template    TGEC----LRTL-----SGHTSGVTSVSFSP--DGKRLVSGSEDGTIKVWD