Input parameters:

  Query = ENSP00000399904 (Len=251)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSP00000399904, Len=251):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MSELEQLRQEAEQLRNQIRDARKACGDSTLTQITAGLDPVGRIQMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLI 80  
WD40-rpts                                                  (_________________WD 1______________

Query       81 IWDSYTTNKVHAIPLRSSWVMTCAYAPSGNFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIITS 160 
WD40-rpts      __)   (_________________WD 2________________)       (________________WD 3_______

Query      161 SGDTTCALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGYA 240 
WD40-rpts      _________)   (_________________WD 4________________)   (_______________WD 5_____

Query      241 FTTGSDDATCR 251 
WD40-rpts      __________)

5 WD40-repeats found in QUERY=ENSP00000399904 (Len=251):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  2    45-83       9.39  502.52  1.0e-05       35.0%     52.67
  WD 2:  Seg  6    87-125      8.88  481.29  2.0e-05       15.0%     53.05
  WD 3:  Seg 10   133-170      7.55  426.70  0.00011       30.0%     46.54
  WD 4:  Seg 14   174-212     10.60  552.56  2.2e-06       42.5%     55.43
  WD 5:  Seg 17   216-251      7.02  404.54  0.00022       32.5%     39.25

Multiple sequence alignment of 5 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   45-83     MRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWD
   WD 2   87-125    TNKVHAIPLRSSWVMTCAYAPSGNFVACGGLDNICSIYS
   WD 3  133-170    VRVSRELPGHTGYLSCCRFLDDNQ-IITSSGDTTCALWD
   WD 4  174-212    GQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWD
   WD 5  216-251    SMCRQTFIGHESDINAVAFFPNGYAFTTGSDDATCR---

   WD40 Template    GECLRTLSGHTSGVTSVSFSPDGKRLVSGSEDGTIKVWD