Input parameters:
Query = ENSP00000399741 (Len=134)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000399741, Len=134):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 MSELDQLRQEAEQLKNQIRITNNIDPVGRIQMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAI 80
WD40-rpts (_________________WD 1________________) (______
Query 81 PLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGTCP 134
WD40-rpts ___________WD 2________________)
2 WD40-repeats found in QUERY=ENSP00000399741 (Len=134):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 2 32-70 9.76 518.02 6.5e-06 35.0% 54.91
WD 2: Seg 6 74-112 9.03 487.60 1.7e-05 15.0% 52.68
Multiple sequence alignment of 2 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 32-70 MRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWD
WD 2 74-112 TNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYN
WD40 Template GECLRTLSGHTSGVTSVSFSPDGKRLVSGSEDGTIKVWD