Input parameters:

  Query = ENSP00000399112 (Len=387)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSP00000399112, Len=387):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 METAPKPGKDVPPKKDKLQTKRKKPRRYWEEETVPTTAGASPGPPRNKKNRELRPQRPKNAYILKKSRISKKPQVPKKPR 80  
WD40-rpts                                                                                      

Query       81 EWKNPESQRGLSGAQDPFPGPAPVPVEVVQKFCRIDKSRKLPHSKAKTRSRLEVAEAEEEETSIKAARSELLLAEEPGFL 160 
WD40-rpts                                                                                      

Query      161 EGEDGEDTAKICQADIVEAVDIASAAKFGPYRLNYSRTGRHLAFGGRRGHVAALDWVTKKLMCEINVMEAVRDIRFLHSE 240 
WD40-rpts       (________________________WD 1________________________)  (________________WD 2__

Query      241 ALLAVAQNRWLHIYDNQGIELHCIRRCDRVTRLEFLPFHFLLATASETGFLTYLDVSVGKIVAALNARAGRLDVMSQNPY 320 
WD40-rpts      ______________)(_________________WD 3_________________)   (_________________WD 4

Query      321 NAVIHLGHSNGTVSLWSPAMKEPLAKILCHRGGVRAVAVDSTGTYMATSGLDHQLKIFDLRGTYQPL 387 
WD40-rpts      ________________)   (_________________WD 5________________)        

5 WD40-repeats found in QUERY=ENSP00000399112 (Len=387):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  3   162-215      7.82  437.82  7.8e-05       22.5%     45.24
  WD 2:  Seg  7   218-255      5.52  342.51  0.00151       12.5%     50.83
  WD 3:  Seg 11   256-295      8.53  466.99  3.2e-05       22.5%     56.77
  WD 4:  Seg 15   299-337      9.08  489.53  1.6e-05       20.0%     54.86
  WD 5:  Seg 19   341-379      9.23  496.05  1.3e-05       25.0%     51.45

Multiple sequence alignment of 5 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  162-215    GEDGEDTAKICQADIVEAVDIASAAKFGPYRLNYSRTGRHLAFGGRRGHVAALD
   WD 2  218-255    -TKKLMCE--------------INVMEAVRDIRFLHSEALLAVAQ-NRWLHIYD
   WD 3  256-295    NQGIELHC--------------IRRCDRVTRLEFLPFHFLLATASETGFLTYLD
   WD 4  299-337    -GKIVAAL--------------NARAGRLDVMSQNPYNAVIHLGHSNGTVSLWS
   WD 5  341-379    -KEPLAKI--------------LCHRGGVRAVAVDSTGTYMATSGLDHQLKIFD

   WD40 Template    TGECLRTL--------------SGHTSGVTSVSFSPDGKRLVSGSEDGTIKVWD