Input parameters:

  Query = ENSP00000398942 (Len=1247)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSP00000398942, Len=1247):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MSELLSTLSSEVKKSQESLTENPSETLKPATSISSISQTKGINVKEILKSLVAAPVEIAECGPEPIPYPDPALKRETQAI 80  
WD40-rpts                                                                                      

Query       81 LPMQFHSFDRSVVVPVKKPPPGSLAVTTVGATTAGSGLPTGSTSNIFAATGATPKSMINTTGAVDSGSSSSSSSSSFVNG 160 
WD40-rpts                                                                                      

Query      161 ATSKNLPAVQTVAPMPEDSAENMSITAKLERALEKVAPLLREIFVDFAPFLSRTLLGSHGQELLIEGLVCMKSSTSVVEL 240 
WD40-rpts                                                                                      

Query      241 VMLLCSQEWQNSIQKNAGLAFIELINEGRLLCHAMKDHIVRVANEAEFILNRQRAEDVHKHAEFESQCAQYAADRREEEK 320 
WD40-rpts                                                                                      

Query      321 MCDHLISAAKHRDHVTANQLKQKILNILTNKHGAWGAVSHSQLHDFWRLDYWEDDLRRRRRFVRNAFGSTHAEALLKAAI 400 
WD40-rpts                                                                                      

Query      401 EYGTEEDVVKSKKTFRSQAIVNQNAETELMLEGDDDAVSLLQEKEIDNLAGPVVLSTPAQLIAPVVVAKGTLSITTTEIY 480 
WD40-rpts                                                                                      

Query      481 FEVDEDDSAFKKIDTKVLAYTEGLHGKWMFSEIRAVFSRRYLLQNTALEVFMANRTSVMFNFPDQATVKKVVYSLPRVGV 560 
WD40-rpts                                                                                      

Query      561 GTSYGLPQARRISLATPRQLYKSSNMTQRWQRREISNFEYLMFLNTIAGRTYNDLNQYPVFPWVLTNYESEELDLTLPGN 640 
WD40-rpts                                                                                      

Query      641 FRDLSKPIGALNPKRAVFYAERYETWEDDQSPPYHYNTHYSTATSTLSWLVRIEPFTTFFLNANDGKFDHPDRTFSSVAR 720 
WD40-rpts                                                                                      

Query      721 SWRTSQRDTSDVKELIPEFYYLPEMFVNSNGYNLGVREDEVVVNDVDLPPWAKKPEDFVRINRMALESEFVSCQLHQWID 800 
WD40-rpts                                                                                      

Query      801 LIFGYKQRGPEAVRALNVFHYLTYEGSVNLDSITDPVLREAMEAQIQNFGQTPSQLLIEPHPPRSSAMHLCFLPQSPLMF 880 
WD40-rpts                                                                                      

Query      881 KDQMQQDVIMVLKFPSNSPVTHVAANTLPHLTIPAVVTVTCSRLFAVNRWHNTVGLRGAPGYSLDQAHHLPIEMDPLIAN 960 
WD40-rpts                                                                                      

Query      961 NSGVNKRQITDLVDQSIQINAHCFVVTADNRYILICGFWDKSFRVYSTETGKLTQIVFGHWDVVTCLARSESYIGGDCYI 1040
WD40-rpts                                                        (___________________WD 1______

Query     1041 VSGSRDATLLLWYWSGRHHIIGDNPNSSDYPAPRAVLTGHDHEVVCVSVCAELGLVISGAKEGPCLVHTITGDLLRALEG 1120
WD40-rpts      ____________)        (_____________________WD 2_____________________)           

Query     1121 PENCLFPRLISVSSEGHCIIYYERGRFSNFSINGKLLAQMEINDSTRAILLSSDGQNLVTGGDNGVVEVWQACDFKQLYI 1200
WD40-rpts                                      (_________________WD 3________________)   (_____

Query     1201 YPGCDAGIRAMDLSHDQRTLITGMASGSIVAFNIDFNRWHYEHQNRY 1247
WD40-rpts      ____________WD 4________________)              

4 WD40-repeats found in QUERY=ENSP00000398942 (Len=1247):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg 15  1011-1053     5.13  326.56  0.00247       32.5%     54.59
  WD 2:  Seg 20  1062-1109     4.40  296.24  0.00632       25.0%     53.29
  WD 3:  Seg 28  1153-1191     5.04  322.80  0.00278       30.0%     57.42
  WD 4:  Seg 32  1195-1233     4.44  298.27  0.00594       22.5%     56.18

Multiple sequence alignment of 4 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1 1011-1053   -GK--------LTQIVFGHWDVVTCLARSESYIGGDCYIVSGSRDATLLLWY
   WD 2 1062-1109   GDNPNSSDYPAPRAVLTGHDHEVVCVSVCA----ELGLVISGAKEGPCLVHT
   WD 3 1153-1191   NGK--------LLAQMEINDS-TRAILLSS----DGQNLVTGGDNGVVEVWQ
   WD 4 1195-1233   -FK--------QLYIYPGCDAGIRAMDLSH----DQRTLITGMASGSIVAFN

   WD40 Template    TGE--------CLRTLSGHTSGVTSVSFSP----DGKRLVSGSEDGTIKVWD