Input parameters:
Query = ENSP00000398620 (Len=102)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000398620, Len=102):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 MAYHSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGAKWTKVHELKEHNGQVTGIDWAPESNRIVTCGTDRNAYVWT 80
WD40-rpts (_______________WD 1_______________)(___________________WD 2___________________)
Query 81 LKGRTWKPTLVILRINRAARCV 102
WD40-rpts
2 WD40-repeats found in QUERY=ENSP00000398620 (Len=102):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 1 1-36 6.00 362.69 0.00081 5.0% 37.70
WD 2: Seg 4 37-80 8.70 474.09 2.5e-05 25.0% 55.93
Multiple sequence alignment of 2 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 1-36 --------MAYHSFLVEPISCHAWNKDRTQIAICPNNHEVHIYE
WD 2 37-80 KSGAKWTKVHELKEHNGQVTGIDWAPESNRIVTCGTDRNAYVWT
WD40 Template TG----ECLRTLSGHTSGVTSVSFSPDGKRLVSGSEDGTIKVWD