Input parameters:

  Query = ENSP00000398242 (Len=424)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSP00000398242, Len=424):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MADKEAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDFSIHRLVLGTHTSDEQNHLVI 80  
WD40-rpts                                                                                      

Query       81 ASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKP 160 
WD40-rpts                                             (______________WD 1_____________)        

Query      161 DPSGECNPDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHES 240 
WD40-rpts           (_________________WD 2_________________)         (__________________WD 3___

Query      241 LFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIF 320 
WD40-rpts      ______________)      (_________________WD 4_________________)(__________________

Query      321 QVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQV 400 
WD40-rpts      _WD 5___________________)(__________________________WD 6________________________

Query      401 WQMAENIYNDEDPEGSVDPEGQGS 424 
WD40-rpts      _)                      

6 WD40-repeats found in QUERY=ENSP00000398242 (Len=424):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  5   120-152      3.67  266.39  0.01589       12.5%     45.19
  WD 2:  Seg  8   166-205      5.95  360.51  0.00086       32.5%     50.86
  WD 3:  Seg 12   215-255      7.90  441.01  7.1e-05       27.5%     44.24
  WD 4:  Seg 15   262-301      7.32  417.21  0.00015       32.5%     54.04
  WD 5:  Seg 19   302-345      6.90  399.52  0.00026       27.5%     51.41
  WD 6:  Seg 23   346-402      5.77  353.18  0.00108       32.5%     55.76

Multiple sequence alignment of 6 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  120-152    ---------------------------INHEGEVNRARYMPQNPCI-I-ATKTPSSDVLVFD
   WD 2  166-205    -C----------------NP---DLRLRGHQKEGYGLSWNPNLSGH-L-LSASDDHTICLWD
   WD 3  215-255    VV----------------DA---KTIFTGHTAVVEDVSWHLLHE-S-LFGSVADDQKLMIWD
   WD 4  262-301    -S----------------KP---SHSVDAHTAEVNCLSFNPYSEFI-L-ATGSADKTVALWD
   WD 5  302-345    LR----------------NLKLKLHSFESHKDEIFQVQWSPHNE-TIL-ASSGTDRRLNVWD
   WD 6  346-402    LSKIGEEQSPEDAEDGPPEL---LFIHGGHTAKISDFSWNPNEPWV-I-CSVSEDNIMQVWQ

   WD40 Template    TG----------------EC---LRTLSGHTSGVTSVSFSPDGK-R-L-VSGSEDGTIKVWD