Input parameters:
Query = ENSP00000397036 (Len=176)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000397036, Len=176):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 XQPAGLRLFTVQIPHKRLRQPPPCYLTAWDGSNFLPLRTKSCGHEVVSCLDVSESGTFLGLGTVTGSVAIYIAFSLQCLY 80
WD40-rpts (_________________WD 1________________)(_______
Query 81 YVREAHGIVVTDVAFLPEKGRGPELLGSHETALFSVAVDSRCQLHLLPSRECSCVAPAPAVCRAYYCDHPAAPECLSRFP 160
WD40-rpts _________________WD 2________________________)
Query 161 LASLLPGNQEPGHCHL 176
WD40-rpts
2 WD40-repeats found in QUERY=ENSP00000397036 (Len=176):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 3 34-72 7.61 428.99 0.00010 25.0% 51.34
WD 2: Seg 7 73-126 4.94 318.74 0.00315 25.0% 44.72
Multiple sequence alignment of 2 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 34-72 -FL---PLRTKSCGHEVVSCLDVSESGTF-----------LGLGTVTGSVAIYI
WD 2 73-126 AFSLQCLYYVREAHGIVVTDVAFLPEKGRGPELLGSHETALFSVAVDSRCQLHL
WD40 Template TGE---CLRTLSGHTSGVTSVSFSPDGKR-----------LVSGSEDGTIKVWD