Input parameters:

  Query = ENSP00000396577 (Len=495)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSP00000396577, Len=495):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MPTESASCSTARQTKQKRKSHSLSIRRTNSSEQERTGLPRDMLEGQDSKLPSSVRSTLLELFGQIEREFENLYIENLELR 80  
WD40-rpts                                                                                      

Query       81 REIDTLNERLAAEGQAIDGAELSKGQLKTKASHSTSQLSQKLKTTYKASTSKIVSSFKTTTSRAACQLVKEYIGHRDGIW 160 
WD40-rpts                           (________________WD 1_______________)       (______________

Query      161 DVSVAKTQPVVLGTASADHTALLWSIETGKCLVKYAGHVGSVNSIKFHPSEQLALTASGDQTAHIWRYAVQLPTPQPVAD 240 
WD40-rpts      ___WD 2_________________)   (_________________WD 3________________)             

Query      241 TSQISGEDEVECSDKDEPDLDGDVSSDCPTIRVPLTSLKSHQGVVIASDWLVGGKQAVTASWDRTANLYDVETSELVHSL 320 
WD40-rpts                               (____________________WD 4___________________)   (______

Query      321 TGHDQELTHCCTHPTQRLVVTSSRDTTFRLWDFRDPSIHSVNVFQGHTDTVTSAVFTVGDNVVSGSDDRTVKVWDLKNMR 400 
WD40-rpts      ___________WD 5________________)     (________________WD 6________________)   (_

Query      401 SPIATIRTDSAINRINVCVGQKIIALPHDNRQVRLFDMSGVRLARLPRSSRQGHRRMVCCSAWSEDHPVCNLFTCGFDRQ 480 
WD40-rpts      ________________WD 7________________)(_____________________WD 8_________________

Query      481 AIGWNINIPALLQEK 495 
WD40-rpts      ____)          

8 WD40-repeats found in QUERY=ENSP00000396577 (Len=495):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  5   102-138      5.04  322.94  0.00276       15.0%     41.77
  WD 2:  Seg  8   146-185      7.55  426.48  0.00011       25.0%     47.98
  WD 3:  Seg 12   189-227      9.94  525.39  5.2e-06       32.5%     57.71
  WD 4:  Seg 18   266-310      8.32  458.17  4.2e-05       27.5%     52.02
  WD 5:  Seg 22   314-352      9.75  517.56  6.6e-06       30.0%     56.35
  WD 6:  Seg 26   358-395      8.35  459.38  4.0e-05       45.0%     49.56
  WD 7:  Seg 30   399-437      7.89  440.51  7.2e-05        7.5%     50.95
  WD 8:  Seg 34   438-485      6.36  377.47  0.00051       20.0%     41.28

Multiple sequence alignment of 8 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  102-138    LSK-----GQ-----LKTKASH----STSQLSQKLK--TTYKASTSKIVSSFK
   WD 2  146-185    -CQ------L-----VKEYIGHRDGIWDVSVAKTQP-VVLGTASADHTALLWS
   WD 3  189-227    -GK------C-----LVKYAGHVGSVNSIKFHPSEQ--LALTASGDQTAHIWR
   WD 4  266-310    SDC------PTIRVPLTSLKSHQGVVIASDWLVGGK--QAVTASWDRTANLYD
   WD 5  314-352    -SE------L-----VHSLTGHDQELTHCCTHPTQR--LVVTSSRDTTFRLWD
   WD 6  358-395    -IH------S-----VNVFQGHTDTVTSAVFTV-GD--NVVSGSDDRTVKVWD
   WD 7  399-437    -MR------S-----PIATIRTDSAINRINVCVGQK--IIALPHDNRQVRLFD
   WD 8  438-485    MSGVRLARLP-----RSSRQGHRRMVCCSAWSEDHPVCNLFTCGFDRQAIGWN

   WD40 Template    TGE------C-----LRTLSGHTSGVTSVSFSPDGK--RLVSGSEDGTIKVWD