Input parameters:

  Query = ENSP00000396569 (Len=309)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSP00000396569, Len=309):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MVSVINTVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYD 80  
WD40-rpts       (_________________WD 1_________________)(____________________WD 2______________

Query       81 RKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAP 160 
WD40-rpts      ______)     (__________________WD 3_________________)      (____________________

Query      161 AVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRV 240 
WD40-rpts      _____WD 4_________________________)      (___________________WD 5_______________

Query      241 FIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVHTHSPWHGGHSLLVFTPPTREGT 309 
WD40-rpts      ___)           (_______________WD 6______________)                   

6 WD40-repeats found in QUERY=ENSP00000396569 (Len=309):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     2-41       9.11  491.08  1.5e-05       20.0%     53.36
  WD 2:  Seg  5    42-87       7.45  422.35  0.00013       27.5%     55.22
  WD 3:  Seg  9    93-133      7.75  434.79  8.6e-05       37.5%     54.49
  WD 4:  Seg 13   140-195      6.86  398.19  0.00027       37.5%     52.86
  WD 5:  Seg 17   202-244      7.54  426.11  0.00011       25.0%     53.30
  WD 6:  Seg 21   256-290      7.28  415.44  0.00016       17.5%     49.93

Multiple sequence alignment of 6 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    2-41     VSV----INTVDTSHEDMIHDAQMDYY----G-----------------TRLATCSSDRSVKIFD
   WD 2   42-87     VRNGGQILIADLRGHEGPVWQVAWAHP--MYG-----------------NILASCSYDRKVIIWR
   WD 3   93-133    -WE----KSHEHAGHDSSVNSVCWAPH--DYG-----------------LILACGSSDGAISLLT
   WD 4  140-195    -WE----VKKINNAHTIGCNAVSWAPA----VVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWK
   WD 5  202-244    -WK----EEQKLEAHSDWVRDVAWAPSIGLPT-----------------STIASCSQDGRVFIWT
   WD 6  256-290    ---------KLLHKFNDVVWHVSWSIT----A-----------------NILAVSGGDNKVHTHS

   WD40 Template    TGE----CLRTLSGHTSGVTSVSFSPD----G-----------------KRLVSGSEDGTIKVWD