Input parameters:

  Query = ENSP00000396238 (Len=920)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSP00000396238, Len=920):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MSRGGSYPHLLWDVRKRSLGLEDPSRLRSRYLGRREFIQRLKLEATLNVHDGCVLTTIRSGHRANIFSAKFLPCTNDKQI 80  
WD40-rpts                                                          (__________________WD 1_____

Query       81 VSCSGDGVIFYTNVEQDAETNRQCQFTCHYGTTYEIMTVPNDPYTFLSCGEDGTVRWFDTRIKTSCTKEDCKDDILINCR 160 
WD40-rpts      ____________) (____________________WD 2___________________)(____________________

Query      161 RAATSVAICPPIPYYLAVGCSDSSVRIYDRRMLGTRATGNYAGRGTTGMVARFIPSHLNNKSCRVTSLCYSEDGQEILVS 240 
WD40-rpts      __WD 3______________________)                        (________________WD 4______

Query      241 YSSDYIYLFDPKDDTARELKTPSAEERREELRQPPVKRLRLRGDWSDTGPRARPESERERDGEQSPNVSLMQRMSDMLSR 320 
WD40-rpts      _________)                                                                      

Query      321 WFEEASEVAQSNRGRGRSRPRGGTSQSDISTLPTVPSSPDLEVSETAMEVDTPAEQFLQPSTSSTMSAQAHSTSSPTESP 400 
WD40-rpts                                                                                      

Query      401 HSTPLLSSPDSEQRQSVEASGHHTHHQSEFLRGPEIALLRKRLQQLRLKKAEQQRQQELAAHTQQQPSTSDQSSHEGSSQ 480 
WD40-rpts                                                                                      

Query      481 DPHASDSPSSVVNKQLGSMSLDEQQDNNNEKLSPKPGTGEPVLSLHYSTEGTTTSTIKLNFTDEWSSIASSSRGIGSHCK 560 
WD40-rpts                                                                                      

Query      561 SEGQEESFVPQSSVQPPEGDSETKAPEESSEDVTKYQEGVSAENPVENHINITQSDKFTAKPLDSNSGERNDLNLDRSCG 640 
WD40-rpts                                                                                      

Query      641 VPEESASSEKAKEPETSDQTSTESATNENNTNPEPQFQTEATGPSAHEETSTRDSALQDTDDSDDDPVLIPGARYRAGPG 720 
WD40-rpts                                                                                      

Query      721 DRFNIRGTTIGDRIMRRSAVARIQEFFRRRKERKEMEELDTLNIRRPLVKMVYKGHRNSRTMIKEANFWGANFVMSGSDC 800 
WD40-rpts                                                    (__________________WD 5___________

Query      801 GHIFIWDRHTAEHLMLLEADNHVVNCLQPHPFDPILASSGIDYDIKIWSPLEESRIFNRKLADEVITRNELMLEETRNTI 880 
WD40-rpts      ______)   (_________________WD 6________________)                               

Query      881 TVPASFMLRMLASLNHIRADRLEGDRSEGSGQENENEDEE 920 
WD40-rpts                                              

6 WD40-repeats found in QUERY=ENSP00000396238 (Len=920):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1    53-93       5.12  326.35  0.00249       32.5%     39.25
  WD 2:  Seg  4    95-139      4.35  294.18  0.00674       20.0%     50.44
  WD 3:  Seg  8   140-189      2.96  236.77  0.03939       25.0%     38.15
  WD 4:  Seg 12   214-250      3.74  269.15  0.01460       22.5%     27.93
  WD 5:  Seg 15   767-807      4.46  298.76  0.00585       25.0%     47.10
  WD 6:  Seg 18   811-849      5.63  347.03  0.00131       27.5%     41.56

Multiple sequence alignment of 6 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   53-93     -CVL----TTI---------RSGHRANIFSAKFLPCTN-DK-QIVSCSGDGVIFYTN
   WD 2   95-139    EQDAETNRQCQ---------FTCHYGTTYEIMTVP--N-DPYTFLSCGEDGTVRWFD
   WD 3  140-189    TRIK----TSCTKEDCKDDILINCRRAATSVAICP--PIPY-YLAVGCSDSSVRIYD
   WD 4  214-250    ---I----PSH---------LNNKSCRVTSLCYSE--D-GQ-EILVSYSSDYIYLFD
   WD 5  767-807    -PLV----KMV---------YKGHRNSRTMIKEANFWG-AN-FVMSGSDCGHIFIWD
   WD 6  811-849    -AEH----LML---------LEADNHVVNCLQPHP--F-DP-ILASSGIDYDIKIWS

   WD40 Template    TGEC----LRT---------LSGHTSGVTSVSFSP--D-GK-RLVSGSEDGTIKVWD