Input parameters:

  Query = ENSP00000396057 (Len=390)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSP00000396057, Len=390):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MTHALEWPSLTAQWLPDVTRPEGKDFSIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKI 80  
WD40-rpts                                                                                      

Query       81 EIEIKINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGHLLS 160 
WD40-rpts           (______________WD 1_____________)             (_________________WD 2_______

Query      161 ASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAE 240 
WD40-rpts      __________)             (________________WD 3_______________)      (____________

Query      241 VNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQS 320 
WD40-rpts      _____WD 4_________________)(___________________WD 5___________________)         

Query      321 PEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEGSVDPEGQGS 390 
WD40-rpts              (_________________WD 6_________________)                      

6 WD40-repeats found in QUERY=ENSP00000396057 (Len=390):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  5    86-118      3.95  278.02  0.01110       12.5%     46.74
  WD 2:  Seg  8   132-171      6.18  369.81  0.00065       32.5%     50.25
  WD 3:  Seg 12   185-221      6.45  380.89  0.00046       27.5%     47.08
  WD 4:  Seg 15   228-267      7.60  428.53  0.00010       32.5%     53.05
  WD 5:  Seg 19   268-311      7.10  407.78  0.00020       27.5%     51.14
  WD 6:  Seg 23   329-368      6.05  364.67  0.00076       32.5%     54.72

Multiple sequence alignment of 6 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   86-118    -----------INHEGEVNRARYMPQNPCI-I-ATKTPSSDVLVFD
   WD 2  132-171    -CNP---DLRLRGHQKEGYGLSWNPNLSGH-L-LSASDDHTICLWD
   WD 3  185-221    -------KTIFTGHTAVVEDVSWHLLHE-S-LFGSVADDQKLMIWD
   WD 4  228-267    -SKP---SHSVDAHTAEVNCLSFNPYSEFI-L-ATGSADKTVALWD
   WD 5  268-311    LRNLKLKLHSFESHKDEIFQVQWSPHNE-TIL-ASSGTDRRLNVWD
   WD 6  329-368    -PEL---LFIHGGHTAKISDFSWNPNEPWV-I-CSVSEDNIMQVWQ

   WD40 Template    TGEC---LRTLSGHTSGVTSVSFSPDGK-R-L-VSGSEDGTIKVWD