Input parameters:
Query = ENSP00000395628 (Len=205)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000395628, Len=205):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 MTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIAS 80
WD40-rpts (_________________WD 1________________) (_________________WD 2______
Query 81 CSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSEVGHDNWVRGVLFHSGGKFILSCADDKTLRVW 160
WD40-rpts __________) (______________WD 3______________)(______________WD 4_____________
Query 161 DYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 205
WD40-rpts ) (_________________WD 5________________)
5 WD40-repeats found in QUERY=ENSP00000395628 (Len=205):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 2 11-49 10.86 563.33 1.6e-06 47.5% 56.72
WD 2: Seg 6 53-91 10.25 538.17 3.5e-06 37.5% 54.70
WD 3: Seg 9 95-128 5.13 326.50 0.00248 20.0% 45.63
WD 4: Seg 13 129-161 8.39 461.08 3.8e-05 32.5% 47.17
WD 5: Seg 17 165-203 10.32 540.96 3.2e-06 40.0% 55.90
Multiple sequence alignment of 5 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 11-49 FECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE
WD 2 53-91 GYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWV
WD 3 95-128 KECKAELREHEHVVECISWAPESSYSSISEATGS-----
WD 4 129-161 ------EVGHDNWVRGVLFHSGGKFILSCADDKTLRVWD
WD 5 165-203 KRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE
WD40 Template GECLRTLSGHTSGVTSVSFSPDGKRLVSGSEDGTIKVWD