Input parameters:

  Query = ENSP00000394717 (Len=769)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSP00000394717, Len=769):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MYPQGRHPAPHQPGQPGFKFTVAESCDRIKDEFQFLQAQYHSLKVEYDKLANEKTEMQRHYVMYYEMSYGLNIEMHKQTE 80  
WD40-rpts                                                                                      

Query       81 IAKRLNTILAQIMPFLSQEHQQQVAQAVERAKQVTMTELNAIIGQQQLQAQHLSHATHGPPVQLPPHPSGLQPPGIPPVT 160 
WD40-rpts                                                                                      

Query      161 GSSSGLLALGALGSQAHLTVKDEKNHHELDHRERESSANNSVSPSESLRASEKHRGSADYSMEAKKRKAEEKDSLSRYDS 240 
WD40-rpts                                                                              (_______

Query      241 DGDKSDDLVVDVSNEDPATPRVSPAHSPPENGLDKARSLKKDAPTSPASVASSSSTPSSKTKDLGHNDKSSTPGLKSNTP 320 
WD40-rpts      __________WD 1_________________)                                                

Query      321 TPRNDAPTPGTSTTPGLRSMPGKPPGMDPIASALRTPISITSSYAAPFAMMSHHEMNGSLTSPGAYAGLHNIPPQMSAAA 400 
WD40-rpts                                                                                      

Query      401 AAAAAAYGRSPMVSFGAVGFDPHPPMRATGLPSSLASIPGGKPAYSFHVSADGQMQPVPFPHDALAGPGIPRHARQINTL 480 
WD40-rpts            (______________WD 2______________)                                (_______

Query      481 SHGEVVCAVTISNPTRHVYTGGKGCVKIWDISQPGSKSPISQLDCLNRDNYIRSCKLLPDGRTLIVGGEASTLTIWDLAS 560 
WD40-rpts      _________WD 3________________)(_____________________WD 4____________________)   

Query      561 PTPRIKAELTSSAPACYALAISPDAKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISHDGTKLWTGGLDNTVR 640 
WD40-rpts        (_________________WD 5________________)   (_________________WD 6______________

Query      641 SWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHHTKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDNL 720 
WD40-rpts      __)(__________________WD 7_________________)  (_________________WD 8____________

Query      721 LNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVIY 769 
WD40-rpts      ____)(__________________WD 9_________________)   

9 WD40-repeats found in QUERY=ENSP00000394717 (Len=769):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1   233-272      4.43  297.47  0.00609       12.5%     -19.03
  WD 2:  Seg  2   407-440      5.08  324.37  0.00264       12.5%     25.45
  WD 3:  Seg  6   473-510      6.19  370.28  0.00064       22.5%     52.42
  WD 4:  Seg 10   511-557      7.48  423.64  0.00012       25.0%     47.06
  WD 5:  Seg 13   563-601      8.61  470.13  2.9e-05       30.0%     55.50
  WD 6:  Seg 17   605-643      9.86  521.89  5.7e-06       35.0%     53.54
  WD 7:  Seg 21   644-684      7.01  404.08  0.00022       25.0%     51.65
  WD 8:  Seg 25   687-725      8.40  461.56  3.7e-05       30.0%     53.86
  WD 9:  Seg 29   726-766      7.57  427.34  0.00011       32.5%     53.88

Multiple sequence alignment of 9 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  233-272    DSL-------SRYDSD-GDKSDDLVVDVSNEDPATPRVSPAHSPPENG
   WD 2  407-440    YGR--------------SPMVSFGAVGFDPHPPMRATGLPSSLASIPG
   WD 3  473-510    -HA-------RQINTL-SHGEVVCAVTISNPTRHVYTGG-KGCVKIWD
   WD 4  511-557    ISQPGSKSPISQLDCL-NRDNYIRSCKLLPDGRTLIVGGEASTLTIWD
   WD 5  563-601    -PR-------IKAELT-SSAPACYALAISPDAKVCFSCCSDGNIAVWD
   WD 6  605-643    -QT-------LVRQFQ-GHTDGASCIDISHDGTKLWTGGLDNTVRSWD
   WD 7  644-684    LRE-------GRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLH
   WD 8  687-725    -KP-------DKYQLH-LHESCVLSLKFAYCGKWFVSTGKDNLLNAWR
   WD 9  726-766    TPY------GASIFQS-KESSSVLSCDISADDKYIVTGSGDKKATVYE

   WD40 Template    TGE-------CLRTLS-GHTSGVTSVSFSPDGKRLVSGSEDGTIKVWD