Input parameters:

  Query = ENSP00000393624 (Len=472)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSP00000393624, Len=472):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MSRRVVRQSKFRHVFGQAAKADQAYEDIRVSKVTWDSSFCAVNPKFLAIIVEAGGGGAFIVLPLAKTGRVDKNYPLVTGH 80  
WD40-rpts                                                                            (_________

Query       81 TAPVLDIDWCPHNDNVIASASDDTTIMVWQIPDYTPMRNITEPIITLEGHSKRVGILSWHPTARNVLLSAGGDNVIIIWN 160 
WD40-rpts      ________WD 1_________________)          (_________________WD 2_________________)

Query      161 VGTGEVLLSLDDMHPDVIHSVCWNSNGSLLATTCKDKTLRIIDPRKGQVVAEQARPHEGARPLRAVFTADGKLLSTGFSR 240 
WD40-rpts         (_________________WD 3_________________)   (___________________WD 4__________

Query      241 MSERQLALWDPNNFEEPVALQEMDTSNGVLLPFYDPDSSIVYLCGKGDSSIRYFEITDEPPFVHYLNTFSSKEPQRGMGF 320 
WD40-rpts      _________)(____________________WD 5___________________)                         

Query      321 MPKRGLDVSKCEIARFYKLHERKCEPIIMTVPRKSDLFQDDLYPDTPGPEPALEADEWLSGQDAEPVLISLRDGYVPPKH 400 
WD40-rpts                             (_____________________WD 6____________________)          

Query      401 RELRVTKRNILDVRPPSGPRRSQSASDAPLSQQHTLETLLEEIKALRERVQAQEQRITALENMLCELVDGTD 472 
WD40-rpts                                                                              

6 WD40-repeats found in QUERY=ENSP00000393624 (Len=472):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  6    71-110      7.39  420.03  0.00014       30.0%     43.15
  WD 2:  Seg  9   121-160      7.02  404.48  0.00022       32.5%     50.33
  WD 3:  Seg 13   164-203      7.66  430.92  9.7e-05       30.0%     55.77
  WD 4:  Seg 17   207-250      4.31  292.83  0.00703       25.0%     46.35
  WD 5:  Seg 21   251-295      4.89  316.59  0.00337       17.5%     41.44
  WD 6:  Seg 28   344-390      3.53  260.52  0.01904       15.0%     29.24

Multiple sequence alignment of 6 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   71-110    -DKNYPLVT----G-HTAP--VLDIDWCPHNDNV-I-ASA---SD--------DTTIMVWQ
   WD 2  121-160    -TEPIITLE----G-HSKR--VGILSWHP-TARNVL-LSA---GG--------DNVIIIWN
   WD 3  164-203    -GEVLLSLD----DMHPDV--IHSVCWNS-NGSL-L-ATT---CK--------DKTLRIID
   WD 4  207-250    -GQVVAEQA----R-PHEGARPLRAVFTA-DGKL-L-STGFSRMS--------ERQLALWD
   WD 5  251-295    PNNFEEPVALQEMD-TSNG--VLLPFYDP-DSSI-VYLCG---KG--------DSSIRYFE
   WD 6  344-390    -CEPIIMTV----P-RKSD--LFQDDLYP-DTPG-P-EPA---LEADEWLSGQDAEPVLIS

   WD40 Template    TGECLRTLS----G-HTSG--VTSVSFSP-DGKR-L-VSG---SE--------DGTIKVWD