Input parameters:

  Query = ENSP00000393429 (Len=420)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSP00000393429, Len=420):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 XFAVLQLYSFSTFPFISPFFPLLCSQDFPPLAATDAVKPAIYKVQCVATLQVGSMQATDPSECGQCLSLAWMPTRPHQHL 80  
WD40-rpts                                                          (__________________WD 1_____

Query       81 AAGYYNGMVVFWNLPTNSPLQRIRLSDGSLKLYPFQCFLAHDQAVRTLQWCKANSHFLVSAGSDRKIKFWDLRRPYEPIN 160 
WD40-rpts      ____________)                  (_________________WD 2_________________)(________

Query      161 SIKRFLSTELAWLLPYNGVTVAQDNCYASYGLCGIHYIDAGYLGFKAYFTAPRKGTVWSLSGSDWLGTIAAGDISGELIA 240 
WD40-rpts      __________WD 3_________________)           (_________________WD 4_______________

Query      241 AILPDMALNPINVKRPVERRFPIYKADLIPYQDSPEGPDHSSASSGVPNPPKARTYTETVNHHYLLFQDTDLGSFHDLLR 320 
WD40-rpts      _)                                                                              

Query      321 REPMLRMQEGEGHSQLCLDRLQLEAIHKVRFSPNLDSYGWLVSGGQSGLVRIHFVRGLASPLGHRMQLESRAHFNAMFQP 400 
WD40-rpts                  (__________________WD 5__________________)                          

Query      401 SSPTRRPGFSPTSHRLLPTP 420 
WD40-rpts                          

5 WD40-repeats found in QUERY=ENSP00000393429 (Len=420):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  3    53-93       7.01  404.22  0.00022       20.0%     38.91
  WD 2:  Seg  6   112-151      5.88  357.75  0.00094       25.0%     48.44
  WD 3:  Seg 10   152-192      3.46  257.70  0.02076        5.0%     26.73
  WD 4:  Seg 14   204-242      6.37  377.61  0.00051       17.5%     47.93
  WD 5:  Seg 19   333-374      3.76  269.80  0.01431       25.0%     33.30

Multiple sequence alignment of 5 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   53-93     -GSMQATD-PSECGQCLSLAWMPTRPHQH---LAAGYYNGMVVFWN
   WD 2  112-151    -LYPFQCF-LAHDQAVRTLQWCK-ANSHF---LVSAGSDRKIKFWD
   WD 3  152-192    LRRPYEPINSIKRFLSTELAWLL--PYNG---VTVAQDNCYASYGL
   WD 4  204-242    -GFKAYFT-APRKGTVWSLSGSD--WLGT---IAAGDISGELIAAI
   WD 5  333-374    -HSQLCLD-RLQLEAIHKVRFSP--NLDSYGWLVSGGQSGLVRIHF

   WD40 Template    TGECLRTL-SGHTSGVTSVSFSP--DGKR---LVSGSEDGTIKVWD