Input parameters:
Query = ENSP00000392931 (Len=157)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000392931, Len=157):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 MLRWLIGGGREPQGLAEKSPLQTIGEEQTQNPYTELLVLKAHHDIVRFLVQLDDYRFASAGDDGIVVVWNAQTGEKLLEL 80
WD40-rpts (________________WD 1________________) (______
Query 81 NGHTQKITAIITFPSLESCEEKNQLILTASADRTVIVWDGDTTRQVQRISCFQSTVKVLVLWLKYLRTVLWQQLAKN 157
WD40-rpts ______________WD 2____________________) (_______________WD 3______________)
3 WD40-repeats found in QUERY=ENSP00000392931 (Len=157):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 4 33-70 7.30 416.34 0.00015 27.5% 53.21
WD 2: Seg 8 74-119 8.74 475.69 2.4e-05 37.5% 56.63
WD 3: Seg 11 123-157 3.51 259.63 0.01957 12.5% 43.85
Multiple sequence alignment of 3 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 33-70 YTELLVLKAHHDIVRFL-VQL-------DDYRFASAGDDGIVVVWN
WD 2 74-119 GEKLLELNGHTQKITAIITFPSLESCEEKNQLILTASADRTVIVWD
WD 3 123-157 TRQVQRISCFQSTVKVLVLWL-------KY--LRTVLWQQLAK--N
WD40 Template GECLRTLSGHTSGVTSVSFSP-------DGKRLVSGSEDGTIKVWD