Input parameters:

  Query = ENSP00000392872 (Len=420)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSP00000392872, Len=420):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MGTSKEKAKTVTLKQALLGHTDTVTCATASLAYHIIVSGSRDRTCIIWDLNKLSFLTQLRGHRAPVSALCINELTGDIVS 80  
WD40-rpts               (_________________WD 1_________________)   (________________WD 2_______

Query       81 CAGTYIHVWSINGNPIVSVNTFTGRSQQIICCCMSEMNEWDTQNVIVTGHSDGVVRFWRMEFLQVPETPAPEPAEVLEMQ 160 
WD40-rpts      _________)(______________________WD 3_____________________)   (_________________

Query      161 EDCPEAQIGQEAQDEDSSDSEADEQSISQDPKDTPSQPSSTSHRPRAASCRATAAWCTDSGSDDSRRWSDQLSLDEKDGF 240 
WD40-rpts      WD 4________________)                                                           

Query      241 IFVNYSEGQTRAHLQGPLSHPHPNPIEVRNYSRLKPGYRWERQLVFRSKLTMHTAFDRKDNAHPAEVTALGISKDHSRIL 320 
WD40-rpts                                                           (_________________WD 5_____

Query      321 VGDSRGRVFSWSVSDQPGRSAADHWVKDEGGDSCSGCSVRFSLTERRHHCRNCGQLFCQKCSRFQSEIKRLKISSPVRVC 400 
WD40-rpts      ___________)                                                                    

Query      401 QNCYYNLQHERGSEDGPRNC 420 
WD40-rpts                          

5 WD40-repeats found in QUERY=ENSP00000392872 (Len=420):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1    10-49       9.34  500.27  1.1e-05       40.0%     52.32
  WD 2:  Seg  5    53-90       6.98  403.15  0.00023       25.0%     52.39
  WD 3:  Seg  9    91-139      6.89  399.39  0.00026       20.0%     54.40
  WD 4:  Seg 13   143-181      6.52  383.83  0.00042        7.5%      8.41
  WD 5:  Seg 19   294-332      8.13  450.45  5.3e-05       25.0%     37.04

Multiple sequence alignment of 5 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   10-49     TV----TLKQALLGHTDTVTCATASLAYH-----IIVSGSRDRTCIIWD
   WD 2   53-90     -L----SFLTQLRGHRAPVSALCINELTG-----DIVSCA-GTYIHVWS
   WD 3   91-139    INGNPIVSVNTFTGRSQQIICCCMSEMNEWDTQNVIVTGHSDGVVRFWR
   WD 4  143-181    -L----QVPETPAPEPAEVLEMQEDCPEA-----QIGQEAQDEDSSDSE
   WD 5  294-332    -T----AFDRKDNAHPAEVTALGISKDHS-----RILVGDSRGRVFSWS

   WD40 Template    TG----ECLRTLSGHTSGVTSVSFSPDGK-----RLVSGSEDGTIKVWD