Input parameters:
Query = ENSP00000392765 (Len=147)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000392765, Len=147):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 MSELDQLRQEAEQLKNQIRDARKACADATLSQITNNIDPVGRIQMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLI 80
WD40-rpts (_________________WD 1______________
Query 81 IWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGTCP 147
WD40-rpts __) (_________________WD 2________________)
2 WD40-repeats found in QUERY=ENSP00000392765 (Len=147):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 2 45-83 9.54 508.86 8.6e-06 35.0% 54.18
WD 2: Seg 6 87-125 8.84 479.72 2.1e-05 15.0% 52.66
Multiple sequence alignment of 2 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 45-83 MRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWD
WD 2 87-125 TNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYN
WD40 Template GECLRTLSGHTSGVTSVSFSPDGKRLVSGSEDGTIKVWD