Input parameters:
Query = ENSP00000391530 (Len=367)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000391530, Len=367):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 MNRFRVSKFRHTEARPPRREDKQLRIFDPRTKPRASQSTQAHENSRDSRLAWMGTWEHLVSTGFNQMREREVKLWDTRFF 80
WD40-rpts (___________WD 1___________) (___
Query 81 SSALASLTLDTSLGCLVPLLDPDSGLLVLAGKGERQLYCYEVVPQQPALSPVTQCVLESVLRGAALVPRQALAVMSCEVL 160
WD40-rpts _________________WD 2___________________)
Query 161 RVLQLSDTAIVPIGYHVPRKAVEFHEDLFPDTAGCVPATDPHSWWAGDNQQVQKVSLNPACRPHPSFTSCLVPPAEPLPD 240
WD40-rpts
Query 241 TAQPAVMETPVGDADASEGFSSPPSSLTSPSTPSSLGPSLSSTSGIGTSPSLRSLQSLLGPSSKFRHAQGTVLHRDSHIT 320
WD40-rpts
Query 321 NLKGLNLTTPGESDGFCANKLRVAVPLLSSGGQVAVLEMREKRHREV 367
WD40-rpts
2 WD40-repeats found in QUERY=ENSP00000391530 (Len=367):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 1 1-28 3.43 256.17 0.02177 12.5% 33.58
WD 2: Seg 7 77-121 3.15 244.98 0.03067 17.5% 34.89
Multiple sequence alignment of 2 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 1-28 ----------------MNRFRVSKFRHTEAR-PPRREDKQLRIFD
WD 2 77-121 TRFFSSALASLTLDTSLGCLVPLLDPDSGLLVLAGKGERQLYCYE
WD40 Template TGECLRTLS----GHTSGVTSVSFSPDGKRL-VSGSEDGTIKVWD