Input parameters:

  Query = ENSP00000390543 (Len=240)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSP00000390543, Len=240):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MTCAYAPSGNFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIITSSGDTTCALWDIETGQQTVGF 80  
WD40-rpts      (__________WD 1_________)       (________________WD 2________________)   (______

Query       81 AGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGYAFTTGSDDATCRLFDLRADQE 160 
WD40-rpts      ___________WD 3________________)   (_________________WD 4________________)(_____

Query      161 LLMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNIWDAMKGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 240 
WD40-rpts      ______________WD 5___________________)   (_________________WD 6________________)

6 WD40-repeats found in QUERY=ENSP00000390543 (Len=240):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     1-25       4.17  287.02  0.00841       10.0%     35.59
  WD 2:  Seg  4    33-70       7.22  412.96  0.00017       30.0%     50.98
  WD 3:  Seg  8    74-112     10.52  549.04  2.5e-06       42.5%     53.60
  WD 4:  Seg 12   116-154     10.37  542.86  3.0e-06       35.0%     51.45
  WD 5:  Seg 16   155-198      8.86  480.53  2.1e-05       30.0%     56.73
  WD 6:  Seg 20   202-240     10.04  529.39  4.6e-06       30.0%     49.38

Multiple sequence alignment of 6 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    1-25     -------------------MTCAYAPSGNFVACGGLDNICSIYS
   WD 2   33-70     -VR----VSRELPGHTGYLSCCRFLDDNQ-IITSSGDTTCALWD
   WD 3   74-112    -GQ----QTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWD
   WD 4  116-154    -SM----CRQTFIGHESDINAVAFFPNGYAFTTGSDDATCRLFD
   WD 5  155-198    LRADQELLMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNIWD
   WD 6  202-240    -GD----RAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN

   WD40 Template    TGE----CLRTLSGHTSGVTSVSFSPDGKRLVSGSEDGTIKVWD