Input parameters:
Query = ENSP00000389617 (Len=366)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000389617, Len=366):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 MLMAWCRGPVLLCLRQGLGTNSFLHGLGQEPFEGARSLCCRSSPRDLRDGEREHEAAQRKAPGAESCPSLPLSISDIGTG 80
WD40-rpts
Query 81 CLSSLENLRLPTLREESSPRELEDSSGDQGRCGPTHQGSEDPSMLSQAQSATEVEERHVSPSCSTSRERPFQAGELILAE 160
WD40-rpts
Query 161 TGEGETKFKKLFRLNNFGLLNSNWGAVPFGKIVGKFPGQILRSSFGKQYMLRRPALEDYVVLMKRGTAITFPKDINMILS 240
WD40-rpts (__________________________________W
Query 241 MMDINPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDISGA 320
WD40-rpts D 1__________________________________)
Query 321 TEDIKSLTFDAVALDMLNPHVTLPVFYPHLKHGGVCAVYVVKRIAF 366
WD40-rpts
1 WD40-repeats found in QUERY=ENSP00000389617 (Len=366):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 7 205-278 2.98 237.68 0.03832 17.5% 30.90
Multiple sequence alignment of 1 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 205-278 FGKQYMLRRPALEDYVVLMKRGTAITFPKDINMILSMMDINPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFE
WD40 Template TGECLRTLSGHTS----------GVTSV----------SFSPDGKRLVSGSED--------------GTIKVWD