Input parameters:
Query = ENSP00000389080 (Len=314)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000389080, Len=314):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 MEDDAPVIYGLEFQARALTPQTAETDAIRFLVGTQSLKYDNQIHIIDFDDENNIINKNVLLHQAGEIWHISASPADRGVL 80
WD40-rpts
Query 81 TTCYNRTSDSKVLTCAAVWRMPKELESGSHESPDDSSSTAQTLELLCHLDNTAHGNMACVVWEPMGDGKKIISLADNHIL 160
WD40-rpts (_________________WD 1______________
Query 161 LWDLQESSSQAVREESEHSEGACTDPVCAIIPRLEALWGRGTLESGNRDGPRHLHLPRASLTEGGPATSLTQGRRTRHGP 240
WD40-rpts __)
Query 241 HSQKDPPRASRMEEGPAECFLGELGLSYDCKKSAICQAYQNAMAKFIQQTLSELTLERVIRTFPNKWSFLTIFK 314
WD40-rpts
1 WD40-repeats found in QUERY=ENSP00000389080 (Len=314):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 8 125-163 3.42 255.89 0.02196 17.5% 43.45
Multiple sequence alignment of 1 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 125-163 LLCHLDNTAHGNMACVVWEPMGDGKKIISLADNHILLWD
WD40 Template ECLRTLSGHTSGVTSVSFSPDG-KRLVSGSEDGTIKVWD