Input parameters:

  Query = ENSP00000387968 (Len=345)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSP00000387968, Len=345):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MYRTKVGLKDRQQLYKLIISQLLYDGYISIANGLINEIKPQSVCAPSEQLLHLIKLGMENDDTAVQYAIGRSDTVAPGTG 80  
WD40-rpts                                                                                      

Query       81 IDLEFDADVQTMSPEASEYETCYVTSHKGPCRVATYSRDGQLIATGSADASIKILDTERMLAKSAMPIEVMMNETAQQNM 160 
WD40-rpts                   (___________________WD 1__________________)                        

Query      161 ENHPVIRTLYDHVDEVTCLAFHPTEQILASGSRDYTLKLFDYSKPSAKRAFKYIQEAEMLRSISFHPSGDFILVGTQHPT 240 
WD40-rpts        (_________________WD 2________________)     (_________________WD 3____________

Query      241 LRLYDINTFQCFVSCNPQDQHTDAICSVNYNSSANMYVTGSKDGCIKLWDGVSNRCITTFEKAHDGAEVCSAIFSKNSKY 320 
WD40-rpts      ____)(____________________WD 4___________________)   (__________________WD 5____

Query      321 ILSSGKDSVAKLWEISTGRTLVRYT 345 
WD40-rpts      _____________)           

5 WD40-repeats found in QUERY=ENSP00000387968 (Len=345):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  5    94-136      8.90  482.18  2.0e-05       25.0%     50.29
  WD 2:  Seg  9   163-201      8.56  468.24  3.0e-05       40.0%     53.22
  WD 3:  Seg 13   207-245      8.13  450.45  5.3e-05       20.0%     52.60
  WD 4:  Seg 17   246-290      9.13  491.91  1.5e-05       32.5%     41.57
  WD 5:  Seg 21   294-334      8.43  462.90  3.6e-05       30.0%     55.53

Multiple sequence alignment of 5 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   94-136    PEA-----SEYETCYVTSHKGP--CRVATYSRDGQLIATGSADASIKILD
   WD 2  163-201    -HP-----V---IRTLYDHVDE--VTCLAFHPTEQILASGSRDYTLKLFD
   WD 3  207-245    -AK-----R---AFKYIQEAEM--LRSISFHPSGDFILVGTQHPTLRLYD
   WD 4  246-290    INTFQCFVS---CNPQDQHTDA--ICSVNYNSSANMYVTGSKDGCIKLWD
   WD 5  294-334    -NR-----C---ITTFEKAHDGAEVCSAIFSKNSKYILSSGKDSVAKLWE

   WD40 Template    TGE-----C---LRTLSGHTSG--VTSVSFSPDGKRLVSGSEDGTIKVWD