Input parameters:

  Query = ENSP00000387004 (Len=611)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSP00000387004, Len=611):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MSDKSELKAELERKKQRLAQIREEKKRKEEERKKKETDQKKEAVAPVQEESDLEKKRREAEALLQSMGLTPESPIVPPPM 80  
WD40-rpts                                                                                      

Query       81 SPSSKSVSTPSEAGSQDSGDGAVGSRRGPIKLGMAKITQVDFPPREIVTYTKETQTPVMAQPKEDEEEDDDVVAPKPPIE 160 
WD40-rpts                                                                                      

Query      161 PEEEKTLKKDEENDSKAPPHELTEEEKQQILHSEEFLSFFDHSTRIVERALSEQINIFFDYSGRDLEDKEGEIQAGAKLS 240 
WD40-rpts                                                                                      

Query      241 LNRQFFDERWSKHRVVSCLDWSSQYPELLVASYNNNEDAPHEPDGVALVWNMKYKKTTPEYVFHCQSAVMSATFAKFHPN 320 
WD40-rpts                                                         (___________________WD 1_____

Query      321 LVVGGTYSGQIVLWDNRSNKRTPVQRTPLSAAAHTHPVYCVNVVGTQNAHNLISISTDGKICSWSLDMLSHPQDSMELVH 400 
WD40-rpts      ______________)           (_________________WD 2________________)(______________

Query      401 KQSKAVAVTSMSFPVGDVNNFVVGSEEGSVYTACRHGSKAGISEMFEGHQGPITGIHCHAAVGAVDFSHLFVTSSFDWTV 480 
WD40-rpts      ________WD 3_____________________)     (____________________WD 4________________

Query      481 KLWTTKNNKPLYSFEDNADYVYDVMWSPTHPALFACVDGMGRLDLWNLNNDTEVPTASISVEGNPALNRVRWTHSGREIA 560 
WD40-rpts      ___)   (_________________WD 5_________________)(____________________WD 6________

Query      561 VGDSEGQIVIYDVGEIAVPRNDEWARFGRTLAEINANRADAEEEAATRIPA 611 
WD40-rpts      ___________)                                       

6 WD40-repeats found in QUERY=ENSP00000387004 (Len=611):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  5   292-335      3.75  269.76  0.01433       27.5%     44.03
  WD 2:  Seg 10   347-385      5.07  324.13  0.00266       30.0%     46.54
  WD 3:  Seg 13   386-434      2.77  229.18  0.04959       30.0%     49.41
  WD 4:  Seg 17   440-484      4.96  319.66  0.00306       22.5%     42.73
  WD 5:  Seg 20   488-527      4.48  299.67  0.00569       20.0%     52.30
  WD 6:  Seg 24   528-572      4.11  284.52  0.00908       15.0%     53.96

Multiple sequence alignment of 6 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  292-335    MKY-----K--------KTTPEYVFHCQSAVMSATF--AK-----FHPNLV-VGGTYSGQIVLWD
   WD 2  347-385    TP----------------LS---AAAHTHPVYCVNVVGTQ------NAHNL-ISISTDGKICSWS
   WD 3  386-434    LDM-----LSHPQDSMELVH---KQSKAVAVTSMSF--PV-----GDVNNF-VVGSEEGSVYTAC
   WD 4  440-484    -AG-----I--------SEM---FEGHQGPITGIHC--HAAVGAVDFSHLF-VTSSFDWTVKLWT
   WD 5  488-527    -NK-----P--------LYS---FEDNADYVYDVMW--SP------THPALFACVDGMGRLDLWN
   WD 6  528-572    LNNDTEVPT--------ASI---SVEGNPALNRVRW--TH------SGREI-AVGDSEGQIVIYD

   WD40 Template    TGE-----C--------LRT---LSGHTSGVTSVSF--SP------DGKRL-VSGSEDGTIKVWD