Input parameters:
Query = ENSP00000386015 (Len=115)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000386015, Len=115):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 MKWGKKVACGSSEGTIYLFNWNGFGATSDRFALRAESIDCMVPVTESLLCTGSTDGVIRAVNILPNRVVGSVGQHTGEPV 80
WD40-rpts (________________WD 1________________) (______________
Query 81 EELALSHCGRFLASCELWWWMTTVGAKKREDHCGL 115
WD40-rpts ___WD 2_________________)
2 WD40-repeats found in QUERY=ENSP00000386015 (Len=115):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 3 25-62 5.96 360.84 0.00085 17.5% 41.53
WD 2: Seg 5 66-105 3.40 255.25 0.02239 17.5% 41.00
Multiple sequence alignment of 2 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 25-62 GATSDRFALRAE-SIDCM-VPVTESLLCTGSTDGVIRAVN
WD 2 66-105 NRVVGSVGQHTGEPVEELALSHCGRFLASCELWWWMTTVG
WD40 Template GECLRTLSGHTS-GVTSVSFSPDGKRLVSGSEDGTIKVWD