Input parameters:
Query = ENSP00000385969 (Len=920)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000385969, Len=920):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 MTAEETVNVKEVEIIKLILDFLNSKKLHISMLALEKESGVINGLFSDDMLFLRQLILDGQWDEVLQFIQPLECMEKFDKK 80
WD40-rpts
Query 81 RFRYIILKQKFLEALCVNNAMSAEDEPQHLEFTMQEAVQCLHALEEYCPSKDDYSKLCLLLTLPRLTNHAEFKDWNPSTA 160
WD40-rpts
Query 161 RVHCFEEACVMVAEFIPADRKLSEAGFKASNNRLFQLVMKGLLYECCVEFCQSKATGEEITESEVLLGIDLLCGNGCDDL 240
WD40-rpts
Query 241 DLSLLSWLQNLPSSVFSCAFEQKMLNIHVDKLLKPTKAAYADLLTPLISKLSPYPSSPMRRPQSADAYMTRSLNPALDGL 320
WD40-rpts
Query 321 TCGLTSHDKRISDLGNKTSPMSHSFANFHYPGVQNLSRSLMLENTECHSIYEESPERSDTPVDAQRPIGSEILGQSSVSE 400
WD40-rpts
Query 401 KEPANGAQNPGPAKQEKNELRDSTEQFQEYYRQRLRYQQHLEQKEQQRQIYQQMLLEGGVNQEDGPDQQQNLTEQFLNRS 480
WD40-rpts
Query 481 IQKLGELNIGMDGLGNEVSALNQQCNGSKGNGSNGSSVTSFTTPPQDSSQRLTHDASNIHTSTPRNPGSTNHIPFLEESP 560
WD40-rpts (________________WD 1_______________) (____________________WD 2__
Query 561 CGSQISSEHSVIKPPLGDSPGSLSRSKGEEDDKSKKQFVCINILEDTQAVRAVAFHPAGGLYAVGSNSKTLRVCAYPDVI 640
WD40-rpts _________________) (______________WD 3_____________)
Query 641 DPSAHETPKQPVVRFKRNKHHKGSIYCVAWSPCGQLLATGSNDKYVKVLPFNAETCNATGPDLEFSMHDGTIRDLAFMEG 720
WD40-rpts (_________________WD 4________________)(_______________________WD 5__
Query 721 PESGGAILISAGAGDCNIYTTDCQRGQGLHALSGHTGHILALYTWSGWMIASGSQDKTVRFWDLRVPSCVRVVGTTFHGT 800
WD40-rpts _____________________) (________________WD 6________________) (_______
Query 801 GSAVASVAVDPSGRLLATGQEDSSCMLYDIRGGRMVQSYHPHSSDVRSVRFSPGAHYLLTGSYDMKIKVTDLQGDLTKQL 880
WD40-rpts _________WD 7_______________) (_________________WD 8________________) (_
Query 881 PIMVVGEHKDKVIQCRWHTQDLSFLSSSADRTVTLWTYNG 920
WD40-rpts ________________WD 9________________)
9 WD40-repeats found in QUERY=ENSP00000385969 (Len=920):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 4 486-522 4.93 318.21 0.00320 15.0% 23.99
WD 2: Seg 7 534-578 5.77 353.14 0.00108 17.5% 19.65
WD 3: Seg 10 603-635 6.71 391.88 0.00033 25.0% 46.67
WD 4: Seg 13 652-690 7.84 438.47 7.7e-05 27.5% 52.08
WD 5: Seg 17 691-742 5.17 328.27 0.00234 20.0% 43.82
WD 6: Seg 20 746-783 8.74 475.74 2.4e-05 37.5% 51.10
WD 7: Seg 25 793-829 8.93 483.68 1.9e-05 35.0% 45.99
WD 8: Seg 28 833-871 9.61 511.50 7.9e-06 42.5% 56.52
WD 9: Seg 32 879-917 7.37 419.09 0.00014 17.5% 49.67
Multiple sequence alignment of 9 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 486-522 -------ELN-------IGMDGLGNEVSALNQ-----QCNGS-KGNGSNGSSVTSFT
WD 2 534-578 HDASNIHTST-------PRNPGSTNHIPFLEE-----SPCGSQISSEHSVIKPPLGD
WD 3 603-635 -------------------ILEDTQAVRAVAF-----HPAGGLYAVGSNSKTLRVCA
WD 4 652-690 -V-----VRF-------KRNKHHKGSIYCVAW-----SPCGQLLATGSNDKYVKVLP
WD 5 691-742 FN-----AETCNATGPDLEFSMHDGTIRDLAFMEGPESGGAILISAGAGDCNIYTTD
WD 6 746-783 -G-----QGL-------HALSGHTGHILAL-Y-----TWSGWMIASGSQDKTVRFWD
WD 7 793-829 VG---------------TTFHGTGSAVASVAV-----DPSGRLLATGQEDSSCMLYD
WD 8 833-871 -G-----RMV-------QSYHPHSSDVRSVRF-----SPGAHYLLTGSYDMKIKVTD
WD 9 879-917 -Q-----LPI-------MVVGEHKDKVIQCRW-----HTQDLSFLSSSADRTVTLWT
WD40 Template TG-----ECL-------RTLSGHTSGVTSVSF-----SPDGKRLVSGSEDGTIKVWD