Input parameters:

  Query = ENSP00000384290 (Len=1066)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSP00000384290, Len=1066):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MEPGKRRTKDDTWKADDLRKHLWAIQSGGSKEERKHREKKLRKESEMDLPEHKEPRCRDPDQDARSRDRVAEVHTAKESP 80  
WD40-rpts                                                                                      

Query       81 RGERDRDRQRERRRDAKDREKEKLKEKHREAEKSHSRGKDREKEKDRRARKEELRQTVAHHNLLGQETRDRQLLERAERK 160 
WD40-rpts                                                                                      

Query      161 GRSVSKVRSEEKDEDSERGDEDRERRYRERKLQYGDSKDNPLKYWLYKEEGERRHRKPREPDRDNKHREKSSTREKREKY 240 
WD40-rpts                                                                                      

Query      241 SKEKSNSFSDKGEERHKEKRHKEGFHFDDERHQSNVDRKEKSAKDEPRKRESQNGEHRNRGASSKRDGTSSQHAENLVRN 320 
WD40-rpts                                                                                      

Query      321 HGKDKDSRRKHGHEEGSSVWWKLDQRPGGEETVEIEKEETDLENARADAYTASCEDDFEDYEDDFEVCDGDDDESSNEPE 400 
WD40-rpts                                                                                      

Query      401 SREKLEELPLAQKKEIQEIQRAINAENERIGELSLKLFQKRGRTEFEKEPRTDTNSSPSRASVCGIFVDFASASHRQKSR 480 
WD40-rpts                                                                                      

Query      481 TQALKQKMRSTKLLRLIDLDFSFTFSLLDLPPVNEYDMYIRNFGKKNTKQAYVQCNEDNVERDIQTEEIETREVWTQHPG 560 
WD40-rpts                                                                                      

Query      561 ESTVVSGGSEQRDTSDAVVMPKIDTPRLCSFLRAACQVMAVLLEEDRLAAEPSWNLRAQDRALYFSDSSSQLNTSLPFLQ 640 
WD40-rpts                                                                                      

Query      641 NRKVSSLHTSRVQRQMVVSVHDLPEKSFVPLLDSKYVLCVWDIWQPSGPQKVLICESQVTCCCLSPLKAFLLFAGTAHGS 720 
WD40-rpts                                                (___________________WD 1______________

Query      721 VVVWDLREDSRLHYSVTLSDGFWTFRTATFSTDGILTSVNHRSPLQAVEPISTSVHKKQSFVLSPFSTQEEMSGLSFHIA 800 
WD40-rpts      ____)                                                                           

Query      801 SLDESGVLNVWVVVELPKADIAGSISDLGLMPGGRVKLVHSALIQLGDSLSHKGNEFWGTTQTLNVKFLPSDPNHFIIGT 880 
WD40-rpts                                                                                      

Query      881 DMGLISHGTRQDLRVAPKLFKPQQHGIRPVKVNVIDFSPFGEPIFLAGCSDGSIRLHQLSSAFPLLQWDSSTDSHAVTGL 960 
WD40-rpts                (_____________________WD 2_____________________)                      

Query      961 QWSPTRPAVFLVQDDTSNIYIWDLLQSDLGPVAKQQVSPNRLVAMAAVGEPEKAGGSFLALVLARASGSIDIQHLKRRWA 1040
WD40-rpts                                                                                      

Query     1041 APEVDECNRLRLLLQEALWPEGKLHK 1066
WD40-rpts                                

2 WD40-repeats found in QUERY=ENSP00000384290 (Len=1066):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  4   683-725      3.01  239.12  0.03667       27.5%     38.05
  WD 2:  Seg 16   891-938      3.18  245.99  0.02973       22.5%     35.50

Multiple sequence alignment of 2 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  683-725    IWQPS-----GPQKVLICESQVTCCCLSPLKAFLL-FAGTAHGSVVVWD
   WD 2  891-938    QDLRVAPKLFKPQQHGIRPVKVNVIDFSP-FGEPIFLAGCSDGSIRLHQ

   WD40 Template    TGECL-------RTLSGHTSGVTSVSFSP-DGKRL-VSGSEDGTIKVWD