Input parameters:
Query = ENSP00000383599 (Len=927)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000383599, Len=927):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 MTAEETVNVKEVEIIKLILDFLNSKKLHISMLALEKESGVINGLFSDDMLFLRQLILDGQWDEVLQFIQPLECMEKFDKK 80
WD40-rpts
Query 81 RFRYIILKQKFLEALCVNNAMSAEDEPQHVRFLFLKLEFTMQEAVQCLHALEEYCPSKDDYSKLCLLLTLPRLTNHAEFK 160
WD40-rpts
Query 161 DWNPSTARVHCFEEACVMVAEFIPADRKLSEAGFKASNNRLFQLVMKGLLYECCVEFCQSKATGEEITESEVLLGIDLLC 240
WD40-rpts
Query 241 GNGCDDLDLSLLSWLQNLPSSVFSCAFEQKMLNIHVDKLLKPTKAAYADLLTPLISKLSPYPSSPMRRPQSADAYMTRSL 320
WD40-rpts
Query 321 NPALDGLTCGLTSHDKRISDLGNKTSPMSHSFANFHYPGVQNLSRSLMLENTECHSIYEESPERSDTPVDAQRPIGSEIL 400
WD40-rpts
Query 401 GQSSVSEKEPANGAQNPGPAKQEKNELRDSTEQFQEYYRQRLRYQQHLEQKEQQRQIYQQMLLEGGVNQEDGPDQQQNLT 480
WD40-rpts
Query 481 EQFLNRSIQKLGELNIGMDGLGNEVSALNQQCNGSKGNGSNGSSVTSFTTPPQDSSQRLTHDASNIHTSTPRNPGSTNHI 560
WD40-rpts (_______________WD 1______________) (___________________
Query 561 PFLEESPCGSQISSEHSVIKPPLGDSPGSLSRSKGEEDDKSKKQFVCINILEDTQAVRAVAFHPAGGLYAVGSNSKTLRV 640
WD40-rpts _WD 2___________________) (______________WD 3____________
Query 641 CAYPDVIDPSAHETPKQPVVRFKRNKHHKGSIYCVAWSPCGQLLATGSNDKYVKVLPFNAETCNATGPDLEFSMHDGTIR 720
WD40-rpts _) (_________________WD 4________________)(______________________
Query 721 DLAFMEGPESGGAILISAGAGDCNIYTTDCQRGQGLHALSGHTGHILALYTWSGWMIASGSQDKTVRFWDLRVPSCVRVV 800
WD40-rpts _WD 5_______________________) (________________WD 6________________) (
Query 801 GTTFHGTGSAVASVAVDPSGRLLATGQEDSSCMLYDIRGGRMVQSYHPHSSDVRSVRFSPGAHYLLTGSYDMKIKVTDLQ 880
WD40-rpts ________________WD 7_______________) (_________________WD 8________________)
Query 881 GDLTKQLPIMVVGEHKDKVIQCRWHTQDLSFLSSSADRTVTLWTYNG 927
WD40-rpts (_________________WD 9________________)
9 WD40-repeats found in QUERY=ENSP00000383599 (Len=927):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 4 495-529 4.45 298.58 0.00588 12.5% 26.41
WD 2: Seg 7 541-585 5.84 355.73 0.00100 17.5% 16.82
WD 3: Seg 10 610-642 6.70 391.55 0.00033 25.0% 46.63
WD 4: Seg 13 659-697 7.83 438.02 7.8e-05 27.5% 52.21
WD 5: Seg 17 698-749 5.17 328.42 0.00233 20.0% 43.07
WD 6: Seg 20 753-790 8.74 475.51 2.4e-05 37.5% 51.20
WD 7: Seg 25 800-836 8.95 484.44 1.8e-05 35.0% 45.67
WD 8: Seg 28 840-878 9.66 513.58 7.4e-06 42.5% 56.79
WD 9: Seg 32 886-924 7.50 424.39 0.00012 17.5% 49.66
Multiple sequence alignment of 9 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 495-529 ---------N-------IGMDGLGNEVSALNQ-----QCNGS-KGNGSNGSSVTSFT
WD 2 541-585 HDASNIHTST-------PRNPGSTNHIPFLEE-----SPCGSQISSEHSVIKPPLGD
WD 3 610-642 -------------------ILEDTQAVRAVAF-----HPAGGLYAVGSNSKTLRVCA
WD 4 659-697 -VV-----RF-------KRNKHHKGSIYCVAW-----SPCGQLLATGSNDKYVKVLP
WD 5 698-749 FNA-----ETCNATGPDLEFSMHDGTIRDLAFMEGPESGGAILISAGAGDCNIYTTD
WD 6 753-790 -GQ-----GL-------HALSGHTGHILAL-Y-----TWSGWMIASGSQDKTVRFWD
WD 7 800-836 VG---------------TTFHGTGSAVASVAV-----DPSGRLLATGQEDSSCMLYD
WD 8 840-878 -GR-----MV-------QSYHPHSSDVRSVRF-----SPGAHYLLTGSYDMKIKVTD
WD 9 886-924 -QL-----PI-------MVVGEHKDKVIQCRW-----HTQDLSFLSSSADRTVTLWT
WD40 Template TGE-----CL-------RTLSGHTSGVTSVSF-----SPDGKRLVSGSEDGTIKVWD