Input parameters:

  Query = ENSP00000382717 (Len=1342)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSP00000382717, Len=1342):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MKRIFSLLEKTWLGAPIQFAWQKTSGNYLAVTGADYIVKIFDRHGQKRSEINLPGNCVAMDWDKDGDVLAVIAEKSSCIY 80  
WD40-rpts      (__________________WD 1__________________)(__________________WD 2_______________

Query       81 LWDANTNKTSQLDNGMRDQMSFLLWSKVGSFLAVGTVKGNLLIYNHQTSRKIPVLGKHTKRITCGCWNAENLLALGGEDK 160 
WD40-rpts      __)   (_________________WD 3________________)   (________________WD 4___________

Query      161 MITVSNQEGDTIRQTQVRSEPSNMQFFLMKMDDRTSAAESMISVVLGKKTLFFLNLNEPDNPADLEFQQDFGNIVCYNWY 240 
WD40-rpts      _____)                                                                          

Query      241 GDGRIMIGFSCGHFVVISTHTGELGQEIFQARNHKDNLTSIAVSQTLNKVATCGDNCIKIQDLVDLKDMYVILNLDEENK 320 
WD40-rpts                              (________________WD 5________________)      (___________

Query      321 GLGTLSWTDDGQLLALSTQRGSLHVFLTKLPILGDACSTRIAYLTSLLEVTVANPVEGELPITVSVDVEPNFVAVGLYHL 400 
WD40-rpts      ______WD 6________________)                                                     

Query      401 AVGMNNRAWFYVLGENAVKKLKDMEYLGTVASICLHSDYAAALFEGKVQLHLIESEILDAQEERETRLFPAVDDKCRILC 480 
WD40-rpts                                                           (_____________________WD 7_

Query      481 HALTSDFLIYGTDTGVVQYFYIEDWQFVNDYRHPVSVKKIFPDPNGTRLVFIDEKSDGFVYCPVNDATYEIPDFSPTIKG 560 
WD40-rpts      ____________________) (_________________WD 8_________________)                  

Query      561 VLWENWPMDKGVFIAYDDDKVYTYVFHKDTIQGAKVILAGSTKVPFAHKPLLLYNGELTCQTQSGKVNNIYLSTHGFLSN 640 
WD40-rpts                                                                                      

Query      641 LKDTGPDELRPMLAQNLMLKRFSDAWEMCRILNDEAAWNELARACLHHMEVEFAIRVYRRIGNVGIVMSLEQIKGIEDYN 720 
WD40-rpts                                                                                      

Query      721 LLAGHLAMFTNDYNLAQDLYLASSCPIAALEMRRDLQHWDSALQLAKHLAPDQIPFISKEYAIQLEFAGDYVNALAHYEK 800 
WD40-rpts                                                                                      

Query      801 GITGDNKEHDEACLAGVAQMSIRMGDIRRGVNQALKHPSRVLKRDCGAILENMKQFSEAAQLYEKGLYYDKAASVYIRSK 880 
WD40-rpts                                                                                      

Query      881 NWAKVGDLLPHVSSPKIHLQYAKAKEADGRYKEAVVAYENAKQWQSVIRIYLDHLNNPEKAVNIVRETQSLDGAKMVARF 960 
WD40-rpts                                                                                      

Query      961 FLQLGDYGSAIQFLVMSKCNNEAFTLAQQHNKMEIYADIIGSEDTTNEDYQSIALYFEGEKRYLQAGKFFLLCGQYSRAL 1040
WD40-rpts                                                                                      

Query     1041 KHFLKCPSSEDNVAIEMAIETVGQAKDELLTNQLIDHLLGENDGMPKDAKYLFRLYMALKQYREAAQTAIIIAREEQSAG 1120
WD40-rpts                                                                                      

Query     1121 NYRNAHDVLFSMYAELKSQKIKIPSEMATNLMILHSYILVKIHVKNGDHMKGARMLIRVANNISKFPSHIVPILTSTVIE 1200
WD40-rpts                                                                                      

Query     1201 CHRAGLKNSAFSFAAMLMRPEYRSKIDAKYKKKIEGMVRRPDISEIEEATTPCPFCKFLLPECELLCPGCKNSIPYCIAT 1280
WD40-rpts                                                                                      

Query     1281 GRHMLKDDWTVCPHCDFPALYSELKIMLNTESTCPMCSERLNAAQLKKISDCTQYLRTEEEL 1342
WD40-rpts                                                                    

8 WD40-repeats found in QUERY=ENSP00000382717 (Len=1342):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     1-42       4.89  316.82  0.00334       15.0%     48.00
  WD 2:  Seg  5    43-83       4.48  299.64  0.00569       20.0%     54.56
  WD 3:  Seg  9    87-125      6.37  377.98  0.00050       15.0%     53.94
  WD 4:  Seg 13   129-166      5.18  328.46  0.00233       25.0%     51.35
  WD 5:  Seg 25   265-302      4.68  307.98  0.00440       22.5%     55.98
  WD 6:  Seg 29   309-347      5.72  351.11  0.00115       20.0%     52.51
  WD 7:  Seg 42   454-501      3.56  261.85  0.01828       15.0%     49.22
  WD 8:  Seg 46   503-542      5.18  328.78  0.00231       22.5%     53.75

Multiple sequence alignment of 8 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    1-42     MKRIFSL--------LEKTWLGAPIQFAWQKTSGNYLAVTGADYI-VKIFD
   WD 2   43-83     RHGQ--K--------RSEINLPGNCVAMDWDKDGDVLAVIAEKSSCIYLWD
   WD 3   87-125    -NKT--S--------QLDNGMRDQMSFLLWSKVGSFLAVGTVKGN-LLIYN
   WD 4  129-166    -SRK--I--------PVLGKHTKRITCGCWNAEN-LLALGGEDKM-ITVSN
   WD 5  265-302    -GQE--I--------FQARNHKDNLTSIAVSQTLNKVATCG-DNC-IKIQD
   WD 6  309-347    -MYV--I--------LNLDEENKGLGTLSWTDDGQLLALSTQRGS-LHVFL
   WD 7  454-501    ESEI--LDAQEERETRLFPAVDDKCRILCHALTSDFLIYGTDTGV-VQYFY
   WD 8  503-542    EDWQ--F--------VNDYRHPVSVKKIFPDPNGTRLVFIDEKSD-GFVYC

   WD40 Template    TGEC--L--------RTLSGHTSGVTSVSFSPDGKRLVSGSEDGT-IKVWD