Input parameters:

  Query = ENSP00000379521 (Len=552)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSP00000379521, Len=552):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MDNKISPEAQVAELELDAVIGFNDIILWDYKNRELLARLSLHKGKIEALAFSPNDLYLVSLGGPDDGSVVVWSIAKRDAI 80  
WD40-rpts                                      (__________________WD 1_________________)     (_

Query       81 CGSPAAGLNVGNATNVIFSRCRDEMFMTAGNGTIRVWELDLPNRKIWPTECQTGQLKRIVMSIGVDDDDSFFYLGTTTGD 160 
WD40-rpts      ________________WD 2_________________)(_____________________WD 3________________

Query      161 ILKMNPRTKLLTDVGPAKDKFSLGVSAIRCLKMGGLLVGSGAGLLVFCKSPGYKPIKKIQLQGGITSITLRGEGHQFLVG 240 
WD40-rpts      ____)      (________________WD 4________________)  (_________________WD 5_______

Query      241 TEESHIYRVSFTDFKETLIATCHFDAVEDIVFPFGTAELFATCAKKDIRVWHTSSNRELLRITVPNMTCHGIDFMRDGKS 320 
WD40-rpts      _________)   (_________________WD 6________________)   (_________________WD 7___

Query      321 IISAWNDGKIRAFAPETGRLMYVINNAHRIGVTAIATTSDCKRVISGGGEGEVRVWQIGCQTQKLEEALKEHKSSVSCIR 400 
WD40-rpts      _____________)   (_________________WD 8_________________)     (_________________

Query      401 VKRNNEECVTASTDGTCIIWDLVRLRRNQMILANTLFQCVCYHPEEFQIITSGTDRKIAYWEVFDGTVIRELEGSLSGSI 480 
WD40-rpts      WD 9________________)   (________________WD10________________)   (______________

Query      481 NGMDITQEGVHFVTGGNDHLVKVWDYNEGEVTHVGVGHSGNITRIRISPGNQYIVSVSADGAILRWKYPYTS 552 
WD40-rpts      ___WD11_________________)   (_________________WD12________________)     

12 WD40-repeats found in QUERY=ENSP00000379521 (Len=552):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  4    33-73       8.53  466.89  3.2e-05       40.0%     47.20
  WD 2:  Seg  8    79-118      9.13  491.82  1.5e-05       22.5%     43.24
  WD 3:  Seg 11   119-165      5.90  358.30  0.00092       17.5%     47.29
  WD 4:  Seg 15   172-209      5.32  334.53  0.00193       20.0%     40.62
  WD 5:  Seg 19   212-250      7.24  413.57  0.00017       20.0%     55.33
  WD 6:  Seg 23   254-292      7.89  440.54  7.2e-05       17.5%     57.36
  WD 7:  Seg 27   296-334      8.60  469.93  2.9e-05       22.5%     56.25
  WD 8:  Seg 31   338-377      8.46  464.23  3.4e-05       32.5%     57.04
  WD 9:  Seg 35   383-421      8.92  482.94  1.9e-05       27.5%     53.94
  WD10:  Seg 39   425-462      6.62  388.07  0.00037       15.0%     57.34
  WD11:  Seg 43   466-505      8.52  466.42  3.2e-05       35.0%     58.93
  WD12:  Seg 47   509-547      9.42  503.98  1.0e-05       35.0%     54.51

Multiple sequence alignment of 12 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   33-73     -RELLARL-------SLHKGK-IEALAFSPNDLYLVSLGGPDDGSVVVWS
   WD 2   79-118    AICGSPAA-------GLNVGN-ATNVIFSRCRDEMFM--TAGNGTIRVWE
   WD 3  119-165    LDLPNRKIWPTECQTGQLKRI-VMSIGVDDDDSFFYL--GTTTGDILKMN
   WD 4  172-209    -TDVGPAK-------DKFSLG-VSAIRCLKMGGLLV---GSGAGLLVFCK
   WD 5  212-250    -GYKPIKK-------IQLQGG-ITSITLRGEGHQFLV--GTEESHIYRVS
   WD 6  254-292    -FKETLIA-------TCHFDA-VEDIVFPFGTAELFA--TCAKKDIRVWH
   WD 7  296-334    -NRELLRI-------TVPNMT-CHGIDFMRDGKSIIS--AWNDGKIRAFA
   WD 8  338-377    -GRLMYVI------NNAHRIG-VTAIATTSDCKRVIS--GGGEGEVRVWQ
   WD 9  383-421    -QKLEEAL-------KEHKSS-VSCIRVKRNNEECVT--ASTDGTCIIWD
   WD10  425-462    -LRRNQMI-------LANTL--FQCVCYHPEEFQIIT--SGTDRKIAYWE
   WD11  466-505    -GTVIREL-------EGSLSGSINGMDITQEGVHFVT--GGNDHLVKVWD
   WD12  509-547    -GEVTHVG-------VGHSGN-ITRIRISPGNQYIVS--VSADGAILRWK

   WD40 Template    TGECLRTL-------SGHTSG-VTSVSFSPDGKRLVS--GSEDGTIKVWD