Input parameters:

  Query = ENSP00000379025 (Len=1052)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSP00000379025, Len=1052):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MENLESRLKNAPYFRCEKGTDSIPLCRKCETCVLAWKIFSTKEWFCRINDISQRRFLVGILKQLNSLYLLHYFQNILQTT 80  
WD40-rpts                                                                                      

Query       81 QGKDFIYNRSRINLSKKEGKVVKSSLNQMLDKTVEQKMKEILYWFANSTQWTKANYTLLLLQMCNPKLLLTAANVIRVLF 160 
WD40-rpts                                                                                      

Query      161 LREENNISGLNQDITDVCFSPEKDHSSKSATSQVYWTAKTQHTSLPLSKAPENEHLLGAASNPEEPWRNSLRCISEMNRL 240 
WD40-rpts       (_______________WD 1_______________)                                           

Query      241 FSGKGDITKPGYDPCNLLVDLDDIRDLSSGFSKYRDFIRYLPIHLSKYILRMLDRHTLNKCASVSQHWAAMAQQVKMDLS 320 
WD40-rpts                                                                                  (___

Query      321 AHGFIQNQITFLQGSYTRGIDPNYANKVSIPVPKMVDDGKSMRVKHPKWKLRTKNEYNLWTAYQNEETQQVLIEERNVFC 400 
WD40-rpts      ____________WD 2______________)                                            (____

Query      401 GTYNVRILSDTWDQNRVIHYSGGDLIAVSSNRKIHLLDIIQVKAIPVEFRGHAGSVRALFLCEEENFLLSGSYDLSIRYW 480 
WD40-rpts      _______________WD 3__________________)(___________________WD 4__________________

Query      481 DLKSGVCTRIFGGHQGTITCMDLCKNRLVSGGRDCQVKVWDVDTGKCLKTFRHKDPILATRINDTYIVSSCERGLVKVWH 560 
WD40-rpts      )   (________________WD 5_______________)   (_______________WD 6_______________)

Query      561 IAMAQLVKTLSGHEGAVKCLFFDQWHLLSGSTDGLVMAWSMVGKYERCLMAFKHPKEVLDVSLLFLRVISACADGKIRIY 640 
WD40-rpts         (________________WD 7_______________)  (_________________WD 8________________

Query      641 NFLNGNCMKVLKANGRGDPVLSFFIQGNRMVVNTESNVLMFQFEHIKWQYAVEKTKQKKNKEKEEEKEENSLMEILSKCN 720 
WD40-rpts      )   (_________________WD 9________________)(_____________WD10____________)      

Query      721 IQVHSPRESVSSKQTVIQELLPGKPPKSRVLLKPAKFSSAVLIEELQSQGKSKSPRRDADDVEKAQKQGQLETPGKLPSH 800 
WD40-rpts                                 (_________________WD11________________)(_____________

Query      801 PKKKSWKIPMSPDQFLLTVSALQHAHNSGEFAYPCRPQTEITDVWGPSISYPRKVLNFKGKSIQRAVDRLRLSNPPIDVK 880 
WD40-rpts      ______WD12___________________)                                                  

Query      881 RTSIPLEIQKLQPNLKISLHSPRVQSTIPQPMIIRSRFSGSLKGGDQVTSSIERAVCSTGPLTSMQVIKPNRMLAPQVGT 960 
WD40-rpts                                                                                      

Query      961 ATLSLKKERPRIYTALDPFRVNTEFVLLTVKEEKEHQEAKMKEYQARESTGVVDPGKVSKAAWIRKIKGLPIDNFTKQGK 1040
WD40-rpts                                                                                      

Query     1041 TAAPELGQNVFI 1052
WD40-rpts                  

12 WD40-repeats found in QUERY=ENSP00000379025 (Len=1052):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  4   162-197      3.43  256.40  0.02161       25.0%     16.64
  WD 2:  Seg  7   317-351      3.49  258.98  0.01996       10.0%      7.82
  WD 3:  Seg 11   396-438      4.99  320.71  0.00296       15.0%     49.61
  WD 4:  Seg 15   439-481      8.45  463.72  3.5e-05       27.5%     52.60
  WD 5:  Seg 19   485-521      8.10  449.43  5.5e-05       40.0%     51.57
  WD 6:  Seg 23   525-560      5.87  357.01  0.00096       30.0%     48.11
  WD 7:  Seg 27   564-600      7.87  439.68  7.4e-05       37.5%     51.93
  WD 8:  Seg 31   603-641      8.19  453.01  4.9e-05       22.5%     53.85
  WD 9:  Seg 35   645-683      7.31  416.68  0.00015       25.0%     47.91
  WD10:  Seg 39   684-714      4.33  293.51  0.00688       10.0%     28.79
  WD11:  Seg 43   748-786      3.40  254.95  0.02259       12.5%     28.36
  WD12:  Seg 46   787-830      4.33  293.48  0.00689       17.5%     13.94

Multiple sequence alignment of 12 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  162-197    REE-----NN----IS---GLNQDITDVCFSPEKDH--SSKSATSQVYWT
   WD 2  317-351    --------MD----LS---AHGFIQNQITFLQGSYTRGIDPNYANKVSIP
   WD 3  396-438    RNV---FCGT----YNVRILSDTWDQNRVIHYSGGDLIAVSSNRKIHLLD
   WD 4  439-481    IIQVKAIPVE----FR---GHAGSVRALFLCEEENFLLSGSYDLSIRYWD
   WD 5  485-521    -GV---CTRI----FG---GHQGTITCMDLCKN--RLVSGGRDCQVKVWD
   WD 6  525-560    -GK---CLKT----F----RHKDPILAT--RINDTYIVSSCERGLVKVWH
   WD 7  564-600    -AQ---LVKT----LS---GHEGAVKCLFF--DQWHLLSGSTDGLVMAWS
   WD 8  603-641    -GK---YERC----LM---AFKHPKEVLDVSLLFLRVISACADGKIRIYN
   WD 9  645-683    -GN---CMKV----LK---ANGRGDPVLSFFIQGNRMVVNTESNVLMFQF
   WD10  684-714    -------------------EHIKWQYAVEKTKQKKNKEKEEEKEENSLME
   WD11  748-786    -SR---VLLK----PA---KFSSAVLIEELQSQGKSKSPRRDADDVEKAQ
   WD12  787-830    KQG---QLETPGKLPS---HPKKKSWKIPMSPDQFLLTVSALQHAHNSGE

   WD40 Template    TGE---CLRT----LS---GHTSGVTSVSFSPDGKRLVSGSEDGTIKVWD