Input parameters:

  Query = ENSP00000378930 (Len=1063)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSP00000378930, Len=1063):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MGFDATLSDTNEPLVVIAQPSSEMPLLTSTNEFYTKGMTPVQDKEEGKNSSKCYIQVTGMTCASCVANIERNLRREEGIY 80  
WD40-rpts                                                                                      

Query       81 SILVALMAGKAEVRYNPAVIQPPMIAEFIRELGFGATVIENADEGDGVLELVVRGMTCASCVHKIESSLTKHRGILYCSV 160 
WD40-rpts                                                                                      

Query      161 ALATNKAHIKYDPEIIGPRDIIHTIESLGFEASLVKKDRSASHLDHKREIRQWRRSFLVSLFFCIPVMGLMIYMMVMDHH 240 
WD40-rpts                                                                                      

Query      241 FATLHHNQNMSKEEMINLHSSMFLERQILPGLSVMNLLSFLLCVPLEFFGGWYFYIQAYKALKHKTANMDVLIVLATTIA 320 
WD40-rpts                                                                                      

Query      321 FAYSLIILLVAMYERAKVNPITFFDTPPMLFVFIALGRWLEHIAKGKTSEALAKLISLQATEATIVTLDSDNILLSEEQV 400 
WD40-rpts                                                                                      

Query      401 DVELVQRGDIIKVVPGGKFPVDGRVIEGHSMVDESLITGEAMPVAKKPGSTVIAGSINQNGSLLICATHVGADTTLSQIV 480 
WD40-rpts                                                                                      

Query      481 KLVEEAQTSKAPIQQFADKLSGYFVPFIVFVSIATLLVWIVIGFLNFEIVETYFPGYNRSISRTETIIRFAFQASITVLC 560 
WD40-rpts                                                                                      

Query      561 IACPCSLGLATPTAVMVGTGVGAQNGILIKGGEPLEMAHKVKVVVFDKTGTITHGTPVVNQVKVLTESNRISHHKILAIV 640 
WD40-rpts                                                                                      

Query      641 GTAESNSEHPLGTAITKYCKQELDTETLGTCIDFQVVPGCGISCKVTNIEGLLHKNNWNIEDNNIKNASLVQIDASNEQS 720 
WD40-rpts                                                                                      

Query      721 STSSSMIIDAQISNALNAQQYKVLIGNREWMIRNGLVINNDVNDFMTEHERKGRTAVVCALFYELCGLIAIADTVKPEAE 800 
WD40-rpts                                                                                      

Query      801 LAIHILKSMGLEVVLMTGDNSKTARSIASQVGITKVFAEVLPSHKVAKVKQLQEEGKRVAMVGDGINDSPALAMANVGIA 880 
WD40-rpts              (___________________________________________WD 1________________________

Query      881 IGTGTDVAIEAADVVLIRNDLLDVVASIDLSRETVKRIRINFVFALIYNLVGIPIAAGVFMPIGLVLQPWMGSAAMAASS 960 
WD40-rpts      ___________________)                                                            

Query      961 VSVVLSSLFLKLYRKPTYESYELPARSQIGQKSPSEISVHVGIDDTSRNSPKLGLLDRIVNYSRASINSLLSDKRSLNSV 1040
WD40-rpts                                                                                      

Query     1041 VTSEPDKHSLLVGDFREDDDTAL 1063
WD40-rpts                             

1 WD40-repeats found in QUERY=ENSP00000378930 (Len=1063):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg 25   809-900      3.52  259.92  0.01940       20.0%     15.36

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  809-900    MGLEVVLMTGDNSKTARSIASQVGITKVFAEVLPSHKVAKVKQLQEEGKRVAMVGDGINDSPALAMANVGIAIGTGTDVAIEAADVVLIRND

   WD40 Template    TGECLRTLSGHT-----------------SGVTS----------------VSFSPDGKRL------VS----GS---------EDGTIKVWD