Input parameters:

  Query = ENSP00000378529 (Len=496)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSP00000378529, Len=496):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MDQDYERRLLRQIVIQNENTMPRVTEMRRTLTPASSPVSSPSKHGDRFIPSRAGANWSVNFHRINENEKSPSQNRKAKDA 80  
WD40-rpts                                                                                      

Query       81 TSDNGKDGLAYSALLKNELLGAGIEKVQDPQTEDRRLQPSTPEKKGLFTYSLSTKRSSPDDGNDVSPYSLSPVSNKSQKL 160 
WD40-rpts                         (_____________WD 1_____________)   (_________________WD 2____

Query      161 LRSPRKPTRKISKIPFKVLDAPELQDDFYLNLVDWSSLNVLSVGLGTCVYLWSACTSQVTRLCDLSVEGDSVTSVGWSER 240 
WD40-rpts      ____________)  (________________WD 3________________)     (_________________WD 4

Query      241 GNLVAVGTHKGFVQIWDAAAGKKLSMLEGHTARVGALAWNAEQLSSGSRDRMILQRDIRTPPLQSERRLQGHRQEVCGLK 320 
WD40-rpts      ________________)   (________________WD 5_______________)(___________________WD 

Query      321 WSTDHQLLASGGNDNKLLVWNHSSLSPVQQYTEHLAAVKAIAWSPHQHGLLASGGGTADRCIRFWNTLTGQPLQCIDTGS 400 
WD40-rpts      6___________________)   (__________________WD 7__________________)   (__________

Query      401 QVCNLAWSKHANELVSTHGYSQNQILVWKYPSLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSKTRSTK 480 
WD40-rpts      _______WD 8_________________)   (_________________WD 9________________)         

Query      481 VKWESVSVLNLFTRIR 496 
WD40-rpts                      

9 WD40-repeats found in QUERY=ENSP00000378529 (Len=496):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  2   100-131      3.89  275.23  0.01210       10.0%      5.40
  WD 2:  Seg  3   135-173      5.62  346.88  0.00132       12.5%     21.57
  WD 3:  Seg  5   176-213      2.91  234.78  0.04185        7.5%     45.47
  WD 4:  Seg  9   219-257      8.19  452.92  4.9e-05       32.5%     53.87
  WD 5:  Seg 13   261-297      6.97  402.38  0.00023       35.0%     54.29
  WD 6:  Seg 17   298-341      8.93  483.35  1.9e-05       32.5%     50.74
  WD 7:  Seg 21   345-386      7.03  405.00  0.00022       22.5%     39.82
  WD 8:  Seg 25   390-429      5.60  346.19  0.00134       30.0%     48.69
  WD 9:  Seg 29   433-471      9.52  508.07  8.8e-06       32.5%     54.57

Multiple sequence alignment of 9 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  100-131    ------------LGAGIEKVQDPQTEDRRLQPS---TPEKKGLFTYS
   WD 2  135-173    -K----RSSPDDGNDVSPYSLSPVSNKSQKLLR---SPRKPTRKISK
   WD 3  176-213    -F----KVLDAPELQDDFYLNL-VDWSSLNVLS---VGLGTCVYLWS
   WD 4  219-257    -V----TRLCDLSVEGDSVTSVGWSERGNLVAV---GTHKGFVQIWD
   WD 5  261-297    -G----KKLSMLEGHTARVGALAW--NAEQLSS---GSRDRMILQRD
   WD 6  298-341    IRTPPLQSERRLQGHRQEVCGLKWSTDHQLLAS---GGNDNKLLVWN
   WD 7  345-386    -L----SPVQQYTEHLAAVKAIAWSPHQHGLLASGGGTADRCIRFWN
   WD 8  390-429    -G----QPLQCIDTG-SQVCNLAWSKHANELVS-THGYSQNQILVWK
   WD 9  433-471    -L----TQVAKLTGHSYRVLYLAMSPDGEAIVT---GAGDETLRFWN

   WD40 Template    TG----ECLRTLSGHTSGVTSVSFSPDGKRLVS---GSEDGTIKVWD