Input parameters:

  Query = ENSP00000378256 (Len=912)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSP00000378256, Len=912):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 XGDGPAREALQSLSQRLRVQEQEMELVKAALAEALRLLRLQVPPSSLQGSGTPAPPGDSSLAAPPGLPPTCTPSLVSRGT 80  
WD40-rpts                                                                                      

Query       81 QTETEVELKSSPGPPGLSNGPPAPQGASEEPSGTQSEGGGSSSSGAGSPGPPGILRPLQPPQRADTPRRNSSSSSSPSER 160 
WD40-rpts                                                                                      

Query      161 PRQKLSRKAISSANLLVRSGSTESRGGKDPLSSPGGPGSRRSNYNLEGISVKMFLRGRPITMYIPSGIRSLEELPSGPPP 240 
WD40-rpts                                                             (_____________________WD 

Query      241 ETLSLDWVYGYRGRDSRSNLFVLRSGEVVYFIACVVVLYRPGGGPGGPGGGGQRHYRGHTDCVRCLAVHPDGVRVASGQT 320 
WD40-rpts      1____________________)                           (______________________WD 2____

Query      321 AGVDKDGKPLQPVVHIWDSETLLKLQEIGLGAFERGVGALAFSAADQGAFLCVVDDSNEHMLSVWDCSRGMKLAEIKSTN 400 
WD40-rpts      _________________)(_____________________WD 3_____________________)   (__________

Query      401 DSVLAVGFNPRDSSCIVTSGKSHVHFWNWSGGVGVPGNGTLTRKQGVFGKYKKPKFIPCFVFLPDGDILTGDSEGNILTW 480 
WD40-rpts      _______WD 4________________)(________________________WD 5_______________________

Query      481 GRSPSDSKTPGRGGAKETYGIVAQAHAHEGSIFALCLRRDGTVLSGGGRDRRLVQWGPGLVALQEAEIPEHFGAVRAIAE 560 
WD40-rpts      )                 (_________________WD 6________________)(__________________WD 7

Query      561 GLGSELLVGTTKNALLRGDLAQGFSPVIQGHTDELWGLCTHPSQNRFLTCGHDRQLCLWDGESHALAWSIDLKETGLCAD 640 
WD40-rpts      __________________)(__________________WD 8_________________)   (________________

Query      641 FHPSGAVVAVGLNTGRWLVLDTETREIVSDVIDGNEQLSVVRYSPDGLYLAIGSHDNVIYIYSVSSDGAKSSRFGRCMGH 720 
WD40-rpts      WD 9________________)   (_________________WD10________________)       (_________

Query      721 SSFITHLDWSKDGNFIMSNSGDYEILYWDVAGGCKQLKNRYESRDREWATYTCVLGFHVYVPVRSCQGAEPHVRGPRQPR 800 
WD40-rpts      ________WD11________________)   (_________________WD12________________)         

Query      801 DQRPIHARRLAPRLAGRQGRQHLPVASAGRWGRGAGARHALSNPLPVPRLLPRRLIAAWRDRLARRRGPAPPCPSLAQSP 880 
WD40-rpts                                                                                      

Query      881 TTRGRLFPGLTSRHSRSRIFLEGANGAPAHTV 912 
WD40-rpts                                      

12 WD40-repeats found in QUERY=ENSP00000378256 (Len=912):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  2   216-262      4.45  298.66  0.00587       22.5%     15.73
  WD 2:  Seg  7   290-338      7.14  409.63  0.00019       37.5%     50.59
  WD 3:  Seg 11   339-386      6.52  384.11  0.00041       27.5%     41.75
  WD 4:  Seg 15   390-428      8.24  455.23  4.6e-05       20.0%     58.16
  WD 5:  Seg 19   429-481      5.40  337.54  0.00176       20.0%     45.18
  WD 6:  Seg 22   499-537      7.10  407.79  0.00020       17.5%     53.40
  WD 7:  Seg 26   538-579      5.18  328.71  0.00231       15.0%     55.79
  WD 8:  Seg 30   580-620      8.23  454.81  4.6e-05       20.0%     53.61
  WD 9:  Seg 34   624-661      5.95  360.54  0.00086       17.5%     56.51
  WD10:  Seg 38   665-703      8.95  484.41  1.8e-05       27.5%     58.15
  WD11:  Seg 42   711-749      8.84  479.82  2.1e-05       32.5%     50.84
  WD12:  Seg 46   753-791      5.20  329.32  0.00227        5.0%     29.98

Multiple sequence alignment of 12 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  216-262    RG------RPITMYIPS-GIR----SLEELPSGPPPETLSLDWVY----GYRGR-DS----------RSNLFV
   WD 2  290-338    -G--------------G-GQR----HYRGHTDCVRCLAVHPDGVR----VASGQTAGVDKDGKPLQPVVHIWD
   WD 3  339-386    SE--------------T-LLKLQEIGLGAFERGVGALAFSAADQGAFLCVVDDSNEH----------MLSVWD
   WD 4  390-428    -G--------------M-KLA----EIKSTNDSVLAVGFNPRDSS----CIVTSGKS----------HVHFWN
   WD 5  429-481    WSGGVGVPGNGTLTRKQ-GVF----GKYKKPKFIPCFVFLPDGD-----ILTGDSEG----------NILTWG
   WD 6  499-537    -Y--------------G-IVA----QAHAHEGSIFALCLRRDGTV----LSGGGRDR----------RLVQWG
   WD 7  538-579    PG-----------LVAL-QEA----EIPEHFGAVRAIAEGLGSEL----LVGTT-KN----------ALLRGD
   WD 8  580-620    LA--------------QGFSP----VIQGHTDELWGLCTHPSQNR----FLTCGHDR----------QLCLWD
   WD 9  624-661    -H--------------A-LAW----SIDLKET-GLCADFHPSGAV----VAVGLNTG----------RWLVLD
   WD10  665-703    -R--------------E-IVS----DVIDGNEQLSVVRYSPDGLY----LAIGSHDN----------VIYIYS
   WD11  711-749    -S--------------S-RFG----RCMGHSSFITHLDWSKDGNF----IMSNSGDY----------EILYWD
   WD12  753-791    -G--------------C-KQL----KNRYESRDREWATYTCVLGF----HVYVPVRS----------CQGAEP

   WD40 Template    TG--------------E-CLR----TLSGHTSGVTSVSFSPDGKR----LVSGSEDG----------TIKVWD