Input parameters:

  Query = ENSP00000377936 (Len=509)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSP00000377936, Len=509):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MLLSLPALHLQTSEHHPFFQLPHRRLGPWCSPTGSPAPLSCETGCGEGSWILVCRLLVPTQVSLLSMEEDIDTRKINNSF 80  
WD40-rpts      (_________________WD 1_________________)                                     (__

Query       81 LRDHSYATEADIISTVEFNHTGELLATGDKGGRVVIFQREQESKNQVHRRGEYNVYSTFQSHEPEFDYLKSLEIEEKINK 160 
WD40-rpts      ________________WD 2_________________)                      (___________________

Query      161 IRWLPQQNAAYFLLSTNDKTVKLWKVSERDKRPEGYNLKDEEGRLRDPATITTLRVPVLRPMDLMVEATPRRVFANAHTY 240 
WD40-rpts      _WD 3___________________)                                              (________

Query      241 HINSISVNSDYETYMSADDLRINLWNFEITNQSFNIVDIKPANMEELTEVITAAEFHPHHCNTFVYSSSKGTIRLCDMRA 320 
WD40-rpts      _______WD 4______________)            (_________________WD 5________________)   

Query      321 SALCDRHTKFFEEPEDPSNRSFFSEIISSISDVKFSHSGRYIMTRDYLTVKVWDLNMENRPIETYQVHDYLRSKLCSLYE 400 
WD40-rpts                      (________________WD 6________________)              (___________

Query      401 NDCIFDKFECVWNGSDSVIMTGSYNNFFRMFDRNTKRDVTLEASRENSKPRAILKPRKVCVGGKRRKDEISVDSLDFSKK 480 
WD40-rpts      ________WD 7___________________)   (_________________WD 8________________)      

Query      481 ILHTAWHPSENIIAVAATNNLYIFQDKVN 509 
WD40-rpts                                   

8 WD40-repeats found in QUERY=ENSP00000377936 (Len=509):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     1-40       3.48  258.53  0.02024       17.5%     -13.18
  WD 2:  Seg  3    78-118      7.52  425.29  0.00012       15.0%     44.59
  WD 3:  Seg  7   141-185      4.55  302.67  0.00518       15.0%     44.63
  WD 4:  Seg 14   232-266      6.03  363.63  0.00078       22.5%     46.85
  WD 5:  Seg 18   279-317      6.33  376.23  0.00053       25.0%     37.60
  WD 6:  Seg 22   337-374      6.69  390.90  0.00034       27.5%     41.14
  WD 7:  Seg 26   389-432      5.46  340.00  0.00163       10.0%     43.95
  WD 8:  Seg 29   436-474      3.51  259.59  0.01960        7.5%     22.52

Multiple sequence alignment of 8 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    1-40     MLLSL-PAL---HLQTS----EHHPFFQLP--HRRLGPWCSPTGSPAPLS
   WD 2   78-118    NSFLRDHSY---ATEAD----IISTVEFNH--TGELLATGDKGGRVVIFQ
   WD 3  141-185    SHEPE-FDYLKSLEIEE----KINKIRWLPQQNAAYFLLSTNDKTVKLWK
   WD 4  232-266    ----R-VFA---NAHTY----HINSISVNS--DYETYMS-ADDLRINLWN
   WD 5  279-317    IKP---ANM---EELTE----VITAAEFHP-HHCNTFVYSSSKGTIRLCD
   WD 6  337-374    -PSNR-SFF---SEIIS----SISDVKFSH--SGRYIMTRD-YLTVKVWD
   WD 7  389-432    DYLRS-KLC---SLYENDCIFDKFECVWNG--SDSVIMTGSYNNFFRMFD
   WD 8  436-474    -KRDV-TLE---ASREN----SKPRAILKP--RKVCVGGKRRKDEISVDS

   WD40 Template    TGECL-RTL---SGHTS----GVTSVSFSP--DGKRLVSGSEDGTIKVWD