Input parameters:
Query = ENSP00000376081 (Len=102)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000376081, Len=102):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 MMSIRQRREIRATEVSEDFPAQEENVKLENKLPSGCTSRRLWKILSLTIGGTIALCIGLLTSVYLATLHENDLWFSNIKV 80
WD40-rpts (______________________________________WD 1_____________________________________
Query 81 WSFFDHCIIHSVGSPVVSHVDE 102
WD40-rpts _)
1 WD40-repeats found in QUERY=ENSP00000376081 (Len=102):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 1 1-82 2.97 237.28 0.03878 20.0% 4.77
Multiple sequence alignment of 1 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 1-82 MMSIRQRREIRATEVSEDFPAQEENVKLENKLPSGCTSRRLWKILSLTIGGTIALCIGLLTSVYLATLHENDLWFSNIKVWS
WD40 Template TG--------ECLRTLSGHTSG---VTSVSFSPDGKRLVS---------GS----------------------EDGTIKVWD