Input parameters:

  Query = ENSP00000375875 (Len=588)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSP00000375875, Len=588):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MSSGLRAADFPRWKRHISEQLRRRDRLQRQAFEEIILQYNKLLEKSDLHSVLAQKLQAEKHDVPNRHEISPGHDGTWNDN 80  
WD40-rpts                                                                                      

Query       81 QLQEMAQLRIKHQEELTELHKKRGELAQLVIDLNNQMQRKDREMQMNEAKIAECLQTISDLETECLDLRTKLCDLERANQ 160 
WD40-rpts                                                                                      

Query      161 TLKDEYDALQITFTALEGKLRKTTEENQELVTRWMAEKAQEANRLNAENEKDSRRRQARLQKELAEAAKEPLPVEQDDDI 240 
WD40-rpts                                                                                      

Query      241 EVIVDETSDHTEETSPVRAISRAATRRSVSSFPVPQDNVDTHPGSGKEVRVPATALCVFDAHDGEVNAVQFSPGSRLLAT 320 
WD40-rpts          (______________________WD 1_____________________)_________________WD 2______

Query      321 GGMDRRVKLWEVFGEKCEFKGSLSGSNAGITSIEFDSAGSYLLAASNDFASRIWTVDDYRLRHTLTGHSGKVLSAKFLLD 400 
WD40-rpts      __________)     (_________________WD 3________________)   (_________________WD 4

Query      401 NARIVSGSHDRTLKLWDLRSKVCIKTVFAGSSCNDIVCTEQCVMSGHFDKKIRFWDIRSESIVREMELLGKITALDLNPE 480 
WD40-rpts      ________________)   (_______________WD 5_______________)  (_________________WD 6

Query      481 RTELLSCSRDDLLKVIDLRTNAIKQTFSAPGFKCGSDWTRVVFSPDGSYVAAGSAEGSLYIWSVLTGKVEKVLSKQHSSS 560 
WD40-rpts      ________________)   (___________________WD 7__________________)   (_____________

Query      561 INAVAWSPSGSHVVSVDKGCKAVLWAQY 588 
WD40-rpts      ____WD 8_________________)  

8 WD40-repeats found in QUERY=ENSP00000375875 (Len=588):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  3   245-293      4.58  303.88  0.00499       17.5%     17.02
  WD 2:  Seg  5   293-331      9.47  505.70  9.5e-06       30.0%     49.66
  WD 3:  Seg  9   337-375      9.24  496.20  1.3e-05       32.5%     53.27
  WD 4:  Seg 13   379-417     10.44  546.00  2.7e-06       45.0%     54.56
  WD 5:  Seg 17   421-456      6.61  387.52  0.00037       22.5%     44.35
  WD 6:  Seg 21   459-497      7.45  422.41  0.00013       25.0%     51.81
  WD 7:  Seg 25   501-543      8.20  453.50  4.8e-05       35.0%     54.21
  WD 8:  Seg 29   547-586      8.29  457.24  4.3e-05       30.0%     48.85

Multiple sequence alignment of 8 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  245-293    DETSDHTEETSPVRAISRA-ATR----RSVSSFPVPQDNVDTHPGS-GKEVRVPA
   WD 2  293-331    -ATALCV----------FD-AHD----GEVNAVQFSPGSRLLATGGMDRRVKLWE
   WD 3  337-375    -CEFKGS----------LS-GSN----AGITSIEFDSAGSYLLAASNDFASRIWT
   WD 4  379-417    -YRLRHT----------LT-GHS----GKVLSAKFLLDNARIVSGSHDRTLKLWD
   WD 5  421-456    -KVCIKT----------VF-AGS----S---CNDIVCTEQCVMSGHFDKKIRFWD
   WD 6  459-497    -SESIVR----------EM-ELL----GKITALDLNPERTELLSCSRDDLLKVID
   WD 7  501-543    -NAIKQT----------FS-APGFKCGSDWTRVVFSPDGSYVAAGSAEGSLYIWS
   WD 8  547-586    -GKVEKV----------LSKQHS----SSINAVAWSPSGSHVVSVDKGCKAVLWA

   WD40 Template    TGECLRT----------LS-GHT----SGVTSVSFSPDGKRLVSGSEDGTIKVWD